RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 ESPNB1AK53 854 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 F8W031 263 aaPredicted RBP13.23□□□□□ -0.29
SCG2-201ENST00000305409 USP5P45974 858 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 TYRO3Q06418 890 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 IFIT1BQ5T764 474 aaKnown RBP13.23□□□□□ -0.29
SCG2-201ENST00000305409 MAPKAPK5Q8IW41 473 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 LINC00301Q8NCQ3 95 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 SLC44A5Q8NCS7 719 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 CLSTN2Q9H4D0 955 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
SCG2-201ENST00000305409 BAZ2BQ9UIF8 2168 aaKnown RBP13.23□□□□□ -0.29
SCG2-201ENST00000305409 AP5Z1O43299 807 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 PLEKHA8P1O95397 391 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 ATP2B1P20020 1258 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 RBM6P78332 1123 aaKnown RBP13.23□□□□□ -0.29
SCG2-201ENST00000305409 TBC1D16Q8TBP0 767 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 WDR66Q8TBY9 1149 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 MXD3Q9BW11 206 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 MRVI1Q9Y6F6 885 aa13.23□□□□□ -0.29
SCG2-201ENST00000305409 BTBD18B2RXH4 712 aa13.22□□□□□ -0.29
SCG2-201ENST00000305409 FMNL1O95466 1100 aaPredicted RBP13.22□□□□□ -0.29
SCG2-201ENST00000305409 CCDC192P0DO97 292 aa13.22□□□□□ -0.29
SCG2-201ENST00000305409 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
SCG2-201ENST00000305409 LUZP1Q86V48 1076 aa13.22□□□□□ -0.29
SCG2-201ENST00000305409 PKNOX2Q96KN3 472 aa13.22□□□□□ -0.29
SCG2-201ENST00000305409 DDX19AQ9NUU7 478 aaKnown RBP13.22□□□□□ -0.29
SCG2-201ENST00000305409 RTEL1Q9NZ71 1219 aa13.22□□□□□ -0.29
SCG2-201ENST00000305409 NR5A1Q13285 461 aa13.22□□□□□ -0.29
SCG2-201ENST00000305409 TRIM29Q14134 588 aa13.22□□□□□ -0.29
SCG2-201ENST00000305409 ANO6Q4KMQ2 910 aa13.22□□□□□ -0.29
SCG2-201ENST00000305409 SPTY2D1Q68D10 685 aaPredicted RBP13.22□□□□□ -0.29
SCG2-201ENST00000305409 UBR3Q6ZT12 1888 aa13.22□□□□□ -0.29
SCG2-201ENST00000305409 CRACR2BQ8N4Y2 399 aaPredicted RBP13.22□□□□□ -0.29
SCG2-201ENST00000305409 PDLIM2Q96JY6 352 aa13.22□□□□□ -0.29
SCG2-201ENST00000305409 SPTLC2O15270 562 aa13.21□□□□□ -0.29
SCG2-201ENST00000305409 MMP10P09238 476 aa13.21□□□□□ -0.29
SCG2-201ENST00000305409 IFNAR1P17181 557 aa13.21□□□□□ -0.29
SCG2-201ENST00000305409 NDUFA8P51970 172 aa13.21□□□□□ -0.29
SCG2-201ENST00000305409 MFSD14BQ5SR56 506 aa13.21□□□□□ -0.29
SCG2-201ENST00000305409 ANO1Q5XXA6 986 aa13.21□□□□□ -0.29
SCG2-201ENST00000305409 NBPF11Q86T75 865 aa13.21□□□□□ -0.29
SCG2-201ENST00000305409 OXER1Q8TDS5 423 aa13.21□□□□□ -0.29
SCG2-201ENST00000305409 MYH2Q9UKX2 1941 aa13.21□□□□□ -0.29
SCG2-201ENST00000305409 TSPY2A6NKD2 308 aa13.21□□□□□ -0.3
SCG2-201ENST00000305409 WDHD1O75717 1129 aaPredicted RBP13.21□□□□□ -0.3
SCG2-201ENST00000305409 BBOX1O75936 387 aa13.21□□□□□ -0.3
SCG2-201ENST00000305409 ATP2B4P23634 1241 aa13.21□□□□□ -0.3
SCG2-201ENST00000305409 PLCD1P51178 756 aa13.21□□□□□ -0.3
SCG2-201ENST00000305409 GTF2IP78347 998 aa13.21□□□□□ -0.3
SCG2-201ENST00000305409 DOK7Q18PE1 504 aa13.21□□□□□ -0.3
SCG2-201ENST00000305409 CCDC73Q6ZRK6 1079 aa13.21□□□□□ -0.3
SCG2-201ENST00000305409 IQCA1Q86XH1 822 aa13.21□□□□□ -0.3
SCG2-201ENST00000305409 SHISA4Q96DD7 197 aa13.21□□□□□ -0.3
SCG2-201ENST00000305409 DNAJC25Q9H1X3 360 aa13.21□□□□□ -0.3
SCG2-201ENST00000305409 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
SCG2-201ENST00000305409 ADCY5O95622 1261 aa13.2□□□□□ -0.3
SCG2-201ENST00000305409 BRAPQ7Z569 592 aa13.2□□□□□ -0.3
SCG2-201ENST00000305409 TRIM22Q8IYM9 498 aa13.2□□□□□ -0.3
SCG2-201ENST00000305409 CLIC6Q96NY7 704 aa13.2□□□□□ -0.3
SCG2-201ENST00000305409 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCG2-201ENST00000305409 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
SCG2-201ENST00000305409 VPS54Q9P1Q0 977 aa13.2□□□□□ -0.3
SCG2-201ENST00000305409 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
SCG2-201ENST00000305409 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
SCG2-201ENST00000305409 BTDP43251 543 aa13.2□□□□□ -0.3
SCG2-201ENST00000305409 SPECC1Q5M775 1068 aa13.2□□□□□ -0.3
SCG2-201ENST00000305409 TMTC2Q8N394 836 aa13.2□□□□□ -0.3
SCG2-201ENST00000305409 AKT1S1Q96B36 256 aa13.2□□□□□ -0.3
SCG2-201ENST00000305409 ZNF830Q96NB3 372 aaPredicted RBP13.2□□□□□ -0.3
SCG2-201ENST00000305409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCG2-201ENST00000305409 PDS5AQ29RF7 1337 aaKnown RBP13.19□□□□□ -0.3
SCG2-201ENST00000305409 USP17L3A6NCW0 530 aa13.19□□□□□ -0.3
SCG2-201ENST00000305409 USP17L4A6NCW7 530 aa13.19□□□□□ -0.3
SCG2-201ENST00000305409 PTMAP06454 111 aaKnown RBP13.19□□□□□ -0.3
SCG2-201ENST00000305409 TFAP4Q01664 338 aa13.19□□□□□ -0.3
SCG2-201ENST00000305409 USP17L1Q7RTZ2 530 aa13.19□□□□□ -0.3
SCG2-201ENST00000305409 CATIPQ7Z7H3 387 aa13.19□□□□□ -0.3
SCG2-201ENST00000305409 DIS3L2Q8IYB7 885 aaKnown RBP13.19□□□□□ -0.3
SCG2-201ENST00000305409 ENGASEQ8NFI3 743 aa13.19□□□□□ -0.3
SCG2-201ENST00000305409 ZNF622Q969S3 477 aaKnown RBP eCLIP13.19□□□□□ -0.3
SCG2-201ENST00000305409 CHD4Q14839 1912 aa13.19□□□□□ -0.3
SCG2-201ENST00000305409 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
SCG2-201ENST00000305409 KINO60870 393 aaKnown RBP13.19□□□□□ -0.3
SCG2-201ENST00000305409 HOXA10P31260 410 aaPredicted RBP13.19□□□□□ -0.3
SCG2-201ENST00000305409 SASS6Q6UVJ0 657 aa13.19□□□□□ -0.3
SCG2-201ENST00000305409 POLR3EQ9NVU0 708 aa13.19□□□□□ -0.3
SCG2-201ENST00000305409 FAM160A1Q05DH4 1040 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 TROAPQ12815 778 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 C12orf60Q5U649 245 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 ZNF772Q68DY9 489 aaPredicted RBP13.18□□□□□ -0.3
SCG2-201ENST00000305409 ADALQ6DHV7 355 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 RASGRP2Q7LDG7 609 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 MRPS27Q92552 414 aaKnown RBP13.18□□□□□ -0.3
SCG2-201ENST00000305409 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
SCG2-201ENST00000305409 CBX8Q9HC52 389 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
SCG2-201ENST00000305409 MKRN1Q9UHC7 482 aaKnown RBP13.18□□□□□ -0.3
SCG2-201ENST00000305409 FGRP09769 529 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 SRGNP10124 158 aa13.18□□□□□ -0.3
SCG2-201ENST00000305409 NOM1Q5C9Z4 860 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms