RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 KRT40Q6A162 431 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 TRIM22Q8IYM9 498 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 ROBO3Q96MS0 1386 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 PPFIA3O75145 1194 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 CALM1P0DP23 149 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 CALM2P0DP24 149 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 CALM3P0DP25 149 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 OTUD7BQ6GQQ9 843 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 FANCBQ8NB91 859 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 TBC1D16Q8TBP0 767 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 TBC1D22AQ8WUA7 517 aa22.57■■□□□ 1.2
HOXC4-201ENST00000303406 TRIM44Q96DX7 344 aaPredicted RBP22.57■■□□□ 1.2
HOXC4-201ENST00000303406 MKRN1Q9UHC7 482 aaKnown RBP22.57■■□□□ 1.2
HOXC4-201ENST00000303406 TNS1Q9HBL0 1735 aaKnown RBP22.56■■□□□ 1.2
HOXC4-201ENST00000303406 MROH7-TTC4A0A0A0MT08 1334 aa22.56■■□□□ 1.2
HOXC4-201ENST00000303406 CTAGE5O15320 804 aa22.56■■□□□ 1.2
HOXC4-201ENST00000303406 DEXIO95424 95 aa22.56■■□□□ 1.2
HOXC4-201ENST00000303406 APBA3O96018 575 aa22.56■■□□□ 1.2
HOXC4-201ENST00000303406 LINC00301Q8NCQ3 95 aa22.56■■□□□ 1.2
HOXC4-201ENST00000303406 PHKBQ93100 1093 aa22.56■■□□□ 1.2
HOXC4-201ENST00000303406 ZKSCAN3Q9BRR0 538 aa22.56■■□□□ 1.2
HOXC4-201ENST00000303406 NOL10Q9BSC4 688 aaKnown RBP22.56■■□□□ 1.2
HOXC4-201ENST00000303406 MYL10Q9BUA6 226 aa22.56■■□□□ 1.2
HOXC4-201ENST00000303406 TNMDQ9H2S6 317 aa22.56■■□□□ 1.2
HOXC4-201ENST00000303406 RBM28Q9NW13 759 aaKnown RBP22.56■■□□□ 1.2
HOXC4-201ENST00000303406 FAM205AQ6ZU69 1335 aa22.55■■□□□ 1.2
HOXC4-201ENST00000303406 MYH2Q9UKX2 1941 aa22.55■■□□□ 1.2
HOXC4-201ENST00000303406 PPEF1O14829 653 aaPredicted RBP22.55■■□□□ 1.2
HOXC4-201ENST00000303406 DDAH1O94760 285 aa22.55■■□□□ 1.2
HOXC4-201ENST00000303406 U2AF2P26368 475 aaKnown RBP eCLIP22.55■■□□□ 1.2
HOXC4-201ENST00000303406 PDE4BQ07343 736 aa22.55■■□□□ 1.2
HOXC4-201ENST00000303406 ADALQ6DHV7 355 aa22.55■■□□□ 1.2
HOXC4-201ENST00000303406 NBPF11Q86T75 865 aa22.55■■□□□ 1.2
HOXC4-201ENST00000303406 COL23A1Q86Y22 540 aaPredicted RBP22.55■■□□□ 1.2
HOXC4-201ENST00000303406 ENAHQ8N8S7 591 aaPredicted RBP22.55■■□□□ 1.2
HOXC4-201ENST00000303406 SLC26A6Q9BXS9 759 aa22.55■■□□□ 1.2
HOXC4-201ENST00000303406 ATP6V0A2Q9Y487 856 aa22.55■■□□□ 1.2
HOXC4-201ENST00000303406 NAV1Q8NEY1 1877 aa22.54■■□□□ 1.2
HOXC4-201ENST00000303406 KIF28PB7ZC32 967 aa22.54■■□□□ 1.2
HOXC4-201ENST00000303406 NPR1P16066 1061 aa22.54■■□□□ 1.2
HOXC4-201ENST00000303406 SLF2Q8IX21 1173 aa22.54■■□□□ 1.2
HOXC4-201ENST00000303406 CCDC144CPQ8IYA2 1237 aa22.54■■□□□ 1.2
HOXC4-201ENST00000303406 CRACR2BQ8N4Y2 399 aaPredicted RBP22.54■■□□□ 1.2
HOXC4-201ENST00000303406 FAM163AQ96GL9 167 aaPredicted RBP22.54■■□□□ 1.2
HOXC4-201ENST00000303406 RNF26Q9BY78 433 aaPredicted RBP22.54■■□□□ 1.2
HOXC4-201ENST00000303406 CYP2D7A0A087X1C5 515 aa22.53■■□□□ 1.2
HOXC4-201ENST00000303406 IFIT1BQ5T764 474 aaKnown RBP22.53■■□□□ 1.2
HOXC4-201ENST00000303406 CCDC73Q6ZRK6 1079 aa22.53■■□□□ 1.2
HOXC4-201ENST00000303406 CATIPQ7Z7H3 387 aa22.53■■□□□ 1.2
HOXC4-201ENST00000303406 CCAR1Q8IX12 1150 aaKnown RBP22.53■■□□□ 1.2
HOXC4-201ENST00000303406 RNF214Q8ND24 703 aa22.53■■□□□ 1.2
HOXC4-201ENST00000303406 NR1I2O75469 434 aa22.52■■□□□ 1.2
HOXC4-201ENST00000303406 PLCG2P16885 1265 aa22.52■■□□□ 1.2
HOXC4-201ENST00000303406 PDE6BP35913 854 aa22.52■■□□□ 1.2
HOXC4-201ENST00000303406 CEBPZQ03701 1054 aaKnown RBP22.52■■□□□ 1.2
HOXC4-201ENST00000303406 STK38Q15208 465 aa22.52■■□□□ 1.2
HOXC4-201ENST00000303406 TPRNQ4KMQ1 711 aa22.52■■□□□ 1.2
HOXC4-201ENST00000303406 CCDC178Q5BJE1 867 aa22.52■■□□□ 1.2
HOXC4-201ENST00000303406 C12orf60Q5U649 245 aa22.52■■□□□ 1.2
HOXC4-201ENST00000303406 ANO1Q5XXA6 986 aa22.52■■□□□ 1.2
HOXC4-201ENST00000303406 FTOQ9C0B1 505 aaKnown RBP eCLIP22.52■■□□□ 1.2
HOXC4-201ENST00000303406 POLLQ9UGP5 575 aa22.52■■□□□ 1.2
HOXC4-201ENST00000303406 SUGT1Q9Y2Z0 365 aa22.52■■□□□ 1.2
HOXC4-201ENST00000303406 SRGNP10124 158 aa22.52■■□□□ 1.19
HOXC4-201ENST00000303406 RXRBP28702 533 aa22.52■■□□□ 1.19
HOXC4-201ENST00000303406 ALDH1B1P30837 517 aa22.52■■□□□ 1.19
HOXC4-201ENST00000303406 FAM160A1Q05DH4 1040 aa22.52■■□□□ 1.19
HOXC4-201ENST00000303406 SLC51AQ86UW1 340 aa22.52■■□□□ 1.19
HOXC4-201ENST00000303406 AMOTL1Q8IY63 956 aa22.52■■□□□ 1.19
HOXC4-201ENST00000303406 ENGASEQ8NFI3 743 aa22.52■■□□□ 1.19
HOXC4-201ENST00000303406 AIFM3Q96NN9 605 aa22.52■■□□□ 1.19
HOXC4-201ENST00000303406 RTFDC1Q9BY42 306 aaPredicted RBP22.52■■□□□ 1.19
HOXC4-201ENST00000303406 GPR75-ASB3A0A0A6YYF3 556 aa22.51■■□□□ 1.19
HOXC4-201ENST00000303406 SPTLC2O15270 562 aa22.51■■□□□ 1.19
HOXC4-201ENST00000303406 CAVIN2O95810 425 aa22.51■■□□□ 1.19
HOXC4-201ENST00000303406 POLR3DP05423 398 aaPredicted RBP22.51■■□□□ 1.19
HOXC4-201ENST00000303406 USP5P45974 858 aa22.51■■□□□ 1.19
HOXC4-201ENST00000303406 ME1P48163 572 aa22.51■■□□□ 1.19
HOXC4-201ENST00000303406 SAFBQ15424 915 aaKnown RBP eCLIP22.51■■□□□ 1.19
HOXC4-201ENST00000303406 STK11IPQ8N1F8 1099 aa22.51■■□□□ 1.19
HOXC4-201ENST00000303406 MRPS27Q92552 414 aaKnown RBP22.51■■□□□ 1.19
HOXC4-201ENST00000303406 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.51■■□□□ 1.19
HOXC4-201ENST00000303406 COA1Q9GZY4 146 aa22.51■■□□□ 1.19
HOXC4-201ENST00000303406 MCM9Q9NXL9 1143 aa22.51■■□□□ 1.19
HOXC4-201ENST00000303406 PCDHA7Q9UN72 937 aa22.51■■□□□ 1.19
HOXC4-201ENST00000303406 JAG2Q9Y219 1238 aa22.51■■□□□ 1.19
HOXC4-201ENST00000303406 DDX60LQ5H9U9 1706 aaKnown RBP22.51■■□□□ 1.19
HOXC4-201ENST00000303406 GAKO14976 1311 aa22.5■■□□□ 1.19
HOXC4-201ENST00000303406 SMIM22K7EJ46 135 aa22.5■■□□□ 1.19
HOXC4-201ENST00000303406 MMP1P03956 469 aa22.5■■□□□ 1.19
HOXC4-201ENST00000303406 TROAPQ12815 778 aa22.5■■□□□ 1.19
HOXC4-201ENST00000303406 SH3RF3Q8TEJ3 882 aaPredicted RBP22.5■■□□□ 1.19
HOXC4-201ENST00000303406 ANKS1AQ92625 1134 aa22.5■■□□□ 1.19
HOXC4-201ENST00000303406 GPR101Q96P66 508 aaPredicted RBP22.5■■□□□ 1.19
HOXC4-201ENST00000303406 GJB4Q9NTQ9 266 aa22.5■■□□□ 1.19
HOXC4-201ENST00000303406 CLIC4Q9Y696 253 aa22.5■■□□□ 1.19
HOXC4-201ENST00000303406 PARP3Q9Y6F1 533 aa22.5■■□□□ 1.19
HOXC4-201ENST00000303406 QSER1Q2KHR3 1735 aa22.49■■□□□ 1.19
HOXC4-201ENST00000303406 PPP6R2O75170 966 aa22.49■■□□□ 1.19
HOXC4-201ENST00000303406 TYRO3Q06418 890 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms