RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 CCDC150Q8NCX0 1101 aa15.63■□□□□ 0.09
CDH8-201ENST00000299345 UBASH3AP57075 661 aa15.63■□□□□ 0.09
CDH8-201ENST00000299345 DYNLL1P63167 89 aaKnown RBP15.63■□□□□ 0.09
CDH8-201ENST00000299345 BSDC1Q9NW68 430 aaPredicted RBP15.63■□□□□ 0.09
CDH8-201ENST00000299345 IMPACTQ9P2X3 320 aa15.63■□□□□ 0.09
CDH8-201ENST00000299345 LRP6O75581 1613 aa15.63■□□□□ 0.09
CDH8-201ENST00000299345 FANCCQ00597 558 aa15.63■□□□□ 0.09
CDH8-201ENST00000299345 NR5A1Q13285 461 aa15.63■□□□□ 0.09
CDH8-201ENST00000299345 KRBA2Q6ZNG9 492 aa15.63■□□□□ 0.09
CDH8-201ENST00000299345 CTCFLQ8NI51 663 aaPredicted RBP15.63■□□□□ 0.09
CDH8-201ENST00000299345 NGLY1Q96IV0 654 aa15.63■□□□□ 0.09
CDH8-201ENST00000299345 BPIFA3Q9BQP9 254 aa15.63■□□□□ 0.09
CDH8-201ENST00000299345 RPS8P62241 208 aaKnown RBP15.62■□□□□ 0.09
CDH8-201ENST00000299345 PPP2R5BQ15173 497 aa15.62■□□□□ 0.09
CDH8-201ENST00000299345 PTPAQ15257 358 aa15.62■□□□□ 0.09
CDH8-201ENST00000299345 RESP18Q5W5W9 173 aa15.62■□□□□ 0.09
CDH8-201ENST00000299345 FOXP1Q9H334 677 aaPredicted RBP15.62■□□□□ 0.09
CDH8-201ENST00000299345 LONRF3Q496Y0 759 aa15.62■□□□□ 0.09
CDH8-201ENST00000299345 CCDC24Q8N4L8 307 aa15.62■□□□□ 0.09
CDH8-201ENST00000299345 MTA3Q9BTC8 594 aa15.62■□□□□ 0.09
CDH8-201ENST00000299345 CRNKL1Q9BZJ0 848 aaKnown RBP15.62■□□□□ 0.09
CDH8-201ENST00000299345 NYXQ9GZU5 481 aa15.62■□□□□ 0.09
CDH8-201ENST00000299345 TFCP2L1Q9NZI6 479 aa15.62■□□□□ 0.09
CDH8-201ENST00000299345 DACH1Q9UI36 760 aa15.62■□□□□ 0.09
CDH8-201ENST00000299345 MINPP1Q9UNW1 487 aa15.62■□□□□ 0.09
CDH8-201ENST00000299345 CYP2D7A0A087X1C5 515 aa15.61■□□□□ 0.09
CDH8-201ENST00000299345 hCG_1642624A0A1W2PR95 340 aa15.61■□□□□ 0.09
CDH8-201ENST00000299345 TRIM75PA6NK02 468 aa15.61■□□□□ 0.09
CDH8-201ENST00000299345 USP17L12C9JPN9 530 aa15.61■□□□□ 0.09
CDH8-201ENST00000299345 USP17L21D6R901 530 aa15.61■□□□□ 0.09
CDH8-201ENST00000299345 POLR2DO15514 142 aaKnown RBP15.61■□□□□ 0.09
CDH8-201ENST00000299345 HOMER1Q86YM7 354 aa15.61■□□□□ 0.09
CDH8-201ENST00000299345 ZSCAN10Q96SZ4 725 aaPredicted RBP15.61■□□□□ 0.09
CDH8-201ENST00000299345 BCL2L12Q9HB09 334 aa15.61■□□□□ 0.09
CDH8-201ENST00000299345 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.61■□□□□ 0.09
CDH8-201ENST00000299345 PCDHA5Q9Y5H7 936 aa15.61■□□□□ 0.09
CDH8-201ENST00000299345 V9GY48 417 aaPredicted RBP15.61■□□□□ 0.09
CDH8-201ENST00000299345 SHANK3Q9BYB0 1731 aa15.61■□□□□ 0.09
CDH8-201ENST00000299345 SMARCE1Q969G3 411 aa15.61■□□□□ 0.09
CDH8-201ENST00000299345 HIBADHP31937 336 aaKnown RBP15.61■□□□□ 0.09
CDH8-201ENST00000299345 CELF1Q92879 486 aaKnown RBP15.61■□□□□ 0.09
CDH8-201ENST00000299345 VPS54Q9P1Q0 977 aa15.61■□□□□ 0.09
CDH8-201ENST00000299345 IKBKBO14920 756 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 SF3B3Q15393 1217 aaKnown RBP15.6■□□□□ 0.09
CDH8-201ENST00000299345 TPTE2Q6XPS3 522 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 MAP3K14Q99558 947 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 SPATA31A5Q5VU36 1347 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 SPATA31A7Q8IWB4 1347 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 ADGRA1Q86SQ6 560 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 DZIP1Q86YF9 867 aaKnown RBP15.6■□□□□ 0.09
CDH8-201ENST00000299345 PDCL2Q8N4E4 241 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 AATFQ9NY61 560 aaKnown RBP eCLIP15.6■□□□□ 0.09
CDH8-201ENST00000299345 JAG2Q9Y219 1238 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 COL14A1Q05707 1796 aaKnown RBP15.6■□□□□ 0.09
CDH8-201ENST00000299345 CALM1P0DP23 149 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 CALM2P0DP24 149 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 CALM3P0DP25 149 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 HSP90AA4PQ58FG1 418 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 SMIM5Q71RC9 77 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 KIF18AQ8NI77 898 aa15.6■□□□□ 0.09
CDH8-201ENST00000299345 RNF26Q9BY78 433 aaPredicted RBP15.6■□□□□ 0.09
CDH8-201ENST00000299345 GTF2F1P35269 517 aaKnown RBP eCLIP15.59■□□□□ 0.09
CDH8-201ENST00000299345 KRT2P35908 639 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 KANK3Q6NY19 840 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 FAM84BQ96KN1 310 aaPredicted RBP15.59■□□□□ 0.09
CDH8-201ENST00000299345 C8orf37Q96NL8 207 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 ABCA3Q99758 1704 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 ANKRD2Q9GZV1 360 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 HPSEQ9Y251 543 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 WTIPA6NIX2 430 aaPredicted RBP15.59■□□□□ 0.09
CDH8-201ENST00000299345 TSPY2A6NKD2 308 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 GNPATO15228 680 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 TOP1P11387 765 aaKnown RBP15.59■□□□□ 0.09
CDH8-201ENST00000299345 SLC4A8Q2Y0W8 1093 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 RBM28Q9NW13 759 aaKnown RBP15.59■□□□□ 0.09
CDH8-201ENST00000299345 PCDHB6Q9Y5E3 794 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 TACC3Q9Y6A5 838 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 STRCQ7RTU9 1775 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 KIF2AO00139 706 aaPredicted RBP15.59■□□□□ 0.09
CDH8-201ENST00000299345 ATP1A3P13637 1013 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 RCAN1P53805 252 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 POSTNQ15063 836 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 AMOTL1Q8IY63 956 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 NOL10Q9BSC4 688 aaKnown RBP15.59■□□□□ 0.09
CDH8-201ENST00000299345 SERTAD1Q9UHV2 236 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 ITGB4P16144 1822 aa15.59■□□□□ 0.09
CDH8-201ENST00000299345 PDE4BQ07343 736 aa15.58■□□□□ 0.09
CDH8-201ENST00000299345 ENAHQ8N8S7 591 aaPredicted RBP15.58■□□□□ 0.09
CDH8-201ENST00000299345 LINC00116Q8NCU8 138 aa15.58■□□□□ 0.09
CDH8-201ENST00000299345 TUBE1Q9UJT0 475 aa15.58■□□□□ 0.09
CDH8-201ENST00000299345 PTPREP23469 700 aa15.58■□□□□ 0.08
CDH8-201ENST00000299345 TBC1D9BQ66K14 1250 aa15.58■□□□□ 0.08
CDH8-201ENST00000299345 OXER1Q8TDS5 423 aa15.58■□□□□ 0.08
CDH8-201ENST00000299345 ANKIB1Q9P2G1 1089 aa15.58■□□□□ 0.08
CDH8-201ENST00000299345 BRIP1Q9BX63 1249 aa15.58■□□□□ 0.08
CDH8-201ENST00000299345 OSBPL5Q9H0X9 879 aaPredicted RBP15.58■□□□□ 0.08
CDH8-201ENST00000299345 NLRP5P59047 1200 aa15.57■□□□□ 0.08
CDH8-201ENST00000299345 BARGINQ6ZT62 677 aa15.57■□□□□ 0.08
CDH8-201ENST00000299345 METTL16Q86W50 562 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms