RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 ERICH6Q7L0X2 663 aa13.03□□□□□ -0.32
RFC4-201ENST00000296273 NECAB2Q7Z6G3 386 aa13.03□□□□□ -0.32
RFC4-201ENST00000296273 ANKRD13CQ8N6S4 541 aa13.03□□□□□ -0.32
RFC4-201ENST00000296273 ANKLE1Q8NAG6 615 aa13.03□□□□□ -0.32
RFC4-201ENST00000296273 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.03□□□□□ -0.32
RFC4-201ENST00000296273 DDX4Q9NQI0 724 aaKnown RBP13.03□□□□□ -0.32
RFC4-201ENST00000296273 PTPRFP10586 1907 aa13.02□□□□□ -0.33
RFC4-201ENST00000296273 GPR75-ASB3A0A0A6YYF3 556 aa13.02□□□□□ -0.33
RFC4-201ENST00000296273 LDHCP07864 332 aa13.02□□□□□ -0.33
RFC4-201ENST00000296273 ADORA1P30542 326 aa13.02□□□□□ -0.33
RFC4-201ENST00000296273 GSTO1P78417 241 aa13.02□□□□□ -0.33
RFC4-201ENST00000296273 API5Q9BZZ5 524 aaKnown RBP13.02□□□□□ -0.33
RFC4-201ENST00000296273 TAOK2Q9UL54 1235 aa13.02□□□□□ -0.33
RFC4-201ENST00000296273 PA2G4Q9UQ80 394 aaKnown RBP13.02□□□□□ -0.33
RFC4-201ENST00000296273 COL2A1P02458 1487 aaPredicted RBP13.02□□□□□ -0.33
RFC4-201ENST00000296273 A0A1B0GUL7 405 aa13.01□□□□□ -0.33
RFC4-201ENST00000296273 HMGCRP04035 888 aa13.01□□□□□ -0.33
RFC4-201ENST00000296273 RHBDL3P58872 404 aa13.01□□□□□ -0.33
RFC4-201ENST00000296273 TIMM10P62072 90 aa13.01□□□□□ -0.33
RFC4-201ENST00000296273 MECOMQ03112 1051 aa13.01□□□□□ -0.33
RFC4-201ENST00000296273 ZNF280CQ8ND82 737 aa13.01□□□□□ -0.33
RFC4-201ENST00000296273 XAGE2Q96GT9 111 aa13.01□□□□□ -0.33
RFC4-201ENST00000296273 PAWRQ96IZ0 340 aaKnown RBP13.01□□□□□ -0.33
RFC4-201ENST00000296273 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.01□□□□□ -0.33
RFC4-201ENST00000296273 TSHZ2Q9NRE2 1034 aa13.01□□□□□ -0.33
RFC4-201ENST00000296273 PHIPQ8WWQ0 1821 aa13.01□□□□□ -0.33
RFC4-201ENST00000296273 SZT2Q5T011 3432 aa13.01□□□□□ -0.33
RFC4-201ENST00000296273 RPTORQ8N122 1335 aa13□□□□□ -0.33
RFC4-201ENST00000296273 BMP8BP34820 402 aa13□□□□□ -0.33
RFC4-201ENST00000296273 SPP2Q13103 211 aa13□□□□□ -0.33
RFC4-201ENST00000296273 TREML2Q5T2D2 321 aa13□□□□□ -0.33
RFC4-201ENST00000296273 AS3MTQ9HBK9 375 aa13□□□□□ -0.33
RFC4-201ENST00000296273 HMX1Q9NP08 348 aaPredicted RBP13□□□□□ -0.33
RFC4-201ENST00000296273 USP17L5A8MUK1 530 aa12.99□□□□□ -0.33
RFC4-201ENST00000296273 CAP2P40123 477 aa12.99□□□□□ -0.33
RFC4-201ENST00000296273 PDE3AQ14432 1141 aa12.99□□□□□ -0.33
RFC4-201ENST00000296273 SH3D19Q5HYK7 790 aa12.99□□□□□ -0.33
RFC4-201ENST00000296273 GPR153Q6NV75 609 aa12.99□□□□□ -0.33
RFC4-201ENST00000296273 SLC17A8Q8NDX2 589 aa12.99□□□□□ -0.33
RFC4-201ENST00000296273 HERC5Q9UII4 1024 aaKnown RBP12.99□□□□□ -0.33
RFC4-201ENST00000296273 NOB1Q9ULX3 412 aaKnown RBP12.99□□□□□ -0.33
RFC4-201ENST00000296273 TRIOBPQ9H2D6 2365 aa12.99□□□□□ -0.33
RFC4-201ENST00000296273 GNAI3P08754 354 aa12.98□□□□□ -0.33
RFC4-201ENST00000296273 SLURP2P0DP57 97 aa12.98□□□□□ -0.33
RFC4-201ENST00000296273 MS4A1P11836 297 aa12.98□□□□□ -0.33
RFC4-201ENST00000296273 MTX1Q13505 466 aa12.98□□□□□ -0.33
RFC4-201ENST00000296273 B4GALNT3Q6L9W6 998 aa12.98□□□□□ -0.33
RFC4-201ENST00000296273 CCDC84Q86UT8 332 aaPredicted RBP12.98□□□□□ -0.33
RFC4-201ENST00000296273 NSUN4Q96CB9 384 aaKnown RBP12.98□□□□□ -0.33
RFC4-201ENST00000296273 GDF15Q99988 308 aa12.98□□□□□ -0.33
RFC4-201ENST00000296273 NBPF3Q9H094 633 aa12.98□□□□□ -0.33
RFC4-201ENST00000296273 ASCC2Q9H1I8 757 aaPredicted RBP12.98□□□□□ -0.33
RFC4-201ENST00000296273 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.98□□□□□ -0.33
RFC4-201ENST00000296273 STAP2Q9UGK3 403 aa12.98□□□□□ -0.33
RFC4-201ENST00000296273 GJD2Q9UKL4 321 aa12.98□□□□□ -0.33
RFC4-201ENST00000296273 LOC285556D6RIA3 1793 aa12.98□□□□□ -0.33
RFC4-201ENST00000296273 SRGAP3O43295 1099 aa12.97□□□□□ -0.33
RFC4-201ENST00000296273 HMGCS2P54868 508 aa12.97□□□□□ -0.33
RFC4-201ENST00000296273 TFCP2Q12800 502 aa12.97□□□□□ -0.33
RFC4-201ENST00000296273 GORABQ5T7V8 394 aa12.97□□□□□ -0.33
RFC4-201ENST00000296273 SPATA5Q8NB90 893 aa12.97□□□□□ -0.33
RFC4-201ENST00000296273 NEUROD6Q96NK8 337 aa12.97□□□□□ -0.33
RFC4-201ENST00000296273 MEIS3Q99687 375 aa12.97□□□□□ -0.33
RFC4-201ENST00000296273 NOL10Q9BSC4 688 aaKnown RBP12.97□□□□□ -0.33
RFC4-201ENST00000296273 DHX36Q9H2U1 1008 aaKnown RBP12.97□□□□□ -0.33
RFC4-201ENST00000296273 HMG20BQ9P0W2 317 aa12.97□□□□□ -0.33
RFC4-201ENST00000296273 MORF4L1Q9UBU8 362 aa12.97□□□□□ -0.33
RFC4-201ENST00000296273 RANBP2P49792 3224 aaKnown RBP12.97□□□□□ -0.33
RFC4-201ENST00000296273 CEP290O15078 2479 aa12.96□□□□□ -0.33
RFC4-201ENST00000296273 FAM196BA6NMK8 535 aa12.96□□□□□ -0.33
RFC4-201ENST00000296273 ASNSP08243 561 aa12.96□□□□□ -0.33
RFC4-201ENST00000296273 ARID4AP29374 1257 aaPredicted RBP12.96□□□□□ -0.33
RFC4-201ENST00000296273 ZNF384Q8TF68 577 aa12.96□□□□□ -0.33
RFC4-201ENST00000296273 SOCS4Q8WXH5 440 aa12.96□□□□□ -0.33
RFC4-201ENST00000296273 ARHGAP45Q92619 1136 aa12.96□□□□□ -0.33
RFC4-201ENST00000296273 WDR18Q9BV38 432 aa12.96□□□□□ -0.33
RFC4-201ENST00000296273 RAI14Q9P0K7 980 aa12.96□□□□□ -0.33
RFC4-201ENST00000296273 PI4KBQ9UBF8 816 aa12.96□□□□□ -0.33
RFC4-201ENST00000296273 C19orf81C9J6K1 198 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 DLL1O00548 723 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 SOX1O00570 391 aaPredicted RBP12.95□□□□□ -0.34
RFC4-201ENST00000296273 IGSF3O75054 1194 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 BAG3O95817 575 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 PLCG2P16885 1265 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 HOXA7P31268 230 aaPredicted RBP12.95□□□□□ -0.34
RFC4-201ENST00000296273 BACE1P56817 501 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 IRX3P78415 501 aaPredicted RBP12.95□□□□□ -0.34
RFC4-201ENST00000296273 TEX11Q8IYF3 940 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 TRMT44Q8IYL2 757 aaKnown RBP12.95□□□□□ -0.34
RFC4-201ENST00000296273 C7orf61Q8IZ16 206 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 DIS3LQ8TF46 1054 aaKnown RBP12.95□□□□□ -0.34
RFC4-201ENST00000296273 LRCH3Q96II8 777 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 NUDT12Q9BQG2 462 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 C11orf49Q9H6J7 331 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 GINM1Q9NU53 330 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 TMOD4Q9NZQ9 345 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 OGDHLQ9ULD0 1010 aa12.95□□□□□ -0.34
RFC4-201ENST00000296273 UQCRFS1P1P0C7P4 283 aa12.94□□□□□ -0.34
RFC4-201ENST00000296273 XRCC5P13010 732 aaKnown RBP12.94□□□□□ -0.34
RFC4-201ENST00000296273 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms