RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 YIPF2Q9BWQ6 316 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 ZCWPW1Q9H0M4 648 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 EBF2Q9HAK2 575 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 PRR36Q9H6K5 1346 aa10.42□□□□□ -0.74
PDGFC-201ENST00000274071 TMEM232C9JQI7 657 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 MYO1BO43795 1136 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 ZBED6P86452 979 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 ROR2Q01974 943 aaKnown RBP10.41□□□□□ -0.74
PDGFC-201ENST00000274071 MYO1EQ12965 1108 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 DCTN1Q14203 1278 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 CCDC73Q6ZRK6 1079 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 TRIM58Q8NG06 486 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 MKL1Q969V6 931 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 TBC1D31Q96DN5 1066 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 JAKMIP1Q96N16 626 aaKnown RBP10.41□□□□□ -0.74
PDGFC-201ENST00000274071 NUP58Q9BVL2 599 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 HAUS2Q9NVX0 235 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 ZRANB1Q9UGI0 708 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 CFAP45Q9UL16 551 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 A0A0U1RQJ8 604 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 NUTM2FA1L443 756 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 OPLAHO14841 1288 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 RNF8O76064 485 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 LINGO3P0C6S8 592 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 PIP4K2BP78356 416 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 AKAP17AQ02040 695 aaKnown RBP10.41□□□□□ -0.74
PDGFC-201ENST00000274071 FAM160A1Q05DH4 1040 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 TUBB2AQ13885 445 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 TWISTNBQ3B726 338 aaPredicted RBP10.41□□□□□ -0.74
PDGFC-201ENST00000274071 CFAP100Q494V2 611 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 CCDC178Q5BJE1 867 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 ARHGAP22Q7Z5H3 698 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 DDX54Q8TDD1 881 aaKnown RBP10.41□□□□□ -0.74
PDGFC-201ENST00000274071 ATRIPQ8WXE1 791 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 STAMBPL1Q96FJ0 436 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 TSPAN18Q96SJ8 248 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 TUBB2BQ9BVA1 445 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 AMOTL2Q9Y2J4 779 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 MAP2P11137 1827 aaKnown RBP10.41□□□□□ -0.74
PDGFC-201ENST00000274071 GOLGA6L7A0A1B0GV03 622 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 A0A1B0GVG6 124 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 GOLGA6BA6NDN3 693 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 KIF4AO95239 1232 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 MYL1P05976 194 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 ALDH1B1P30837 517 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 AMPHP49418 695 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 SKOR1P84550 965 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 DRP2Q13474 957 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 CCDC47Q96A33 483 aaKnown RBP10.41□□□□□ -0.74
PDGFC-201ENST00000274071 ALS2CR12Q96Q35 445 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 SDF4Q9BRK5 362 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 ZSWIM6Q9HCJ5 1215 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 KIAA1468Q9P260 1216 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 RIPOR2Q9Y4F9 1068 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 CYP46A1Q9Y6A2 500 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 SLIT1O75093 1534 aa10.41□□□□□ -0.74
PDGFC-201ENST00000274071 PTPRUQ92729 1446 aa10.4□□□□□ -0.74
PDGFC-201ENST00000274071 DNM1LO00429 736 aa10.4□□□□□ -0.74
PDGFC-201ENST00000274071 MGRN1O60291 552 aa10.4□□□□□ -0.74
PDGFC-201ENST00000274071 SERPINC1P01008 464 aa10.4□□□□□ -0.74
PDGFC-201ENST00000274071 MAGEA10P43363 369 aaPredicted RBP10.4□□□□□ -0.74
PDGFC-201ENST00000274071 GCLCP48506 637 aaPredicted RBP10.4□□□□□ -0.74
PDGFC-201ENST00000274071 GNPTABQ3T906 1256 aa10.4□□□□□ -0.74
PDGFC-201ENST00000274071 C6orf89Q6UWU4 347 aa10.4□□□□□ -0.74
PDGFC-201ENST00000274071 TBX22Q9Y458 520 aa10.4□□□□□ -0.74
PDGFC-201ENST00000274071 ARHGAP23Q9P227 1491 aa10.4□□□□□ -0.74
PDGFC-201ENST00000274071 CDC42BPGQ6DT37 1551 aa10.4□□□□□ -0.74
PDGFC-201ENST00000274071 RBM47A0AV96 593 aaKnown RBP10.4□□□□□ -0.75
PDGFC-201ENST00000274071 B4DLN1 442 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 FCHSD2O94868 740 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 SCNN1BP51168 640 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 ADKP55263 362 aaKnown RBP10.4□□□□□ -0.75
PDGFC-201ENST00000274071 RESTQ13127 1097 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 MTX1Q13505 466 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 MTF1Q14872 753 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 SPRED3Q2MJR0 410 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 ZNF569Q5MCW4 686 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 TMTC2Q8N394 836 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 C8orf58Q8NAV2 365 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 RBM41Q96IZ5 413 aaKnown RBP10.4□□□□□ -0.75
PDGFC-201ENST00000274071 COG3Q96JB2 828 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 FTOQ9C0B1 505 aaKnown RBP eCLIP10.4□□□□□ -0.75
PDGFC-201ENST00000274071 RCOR1Q9UKL0 485 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 PHF8Q9UPP1 1060 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 SPG7Q9UQ90 795 aa10.4□□□□□ -0.75
PDGFC-201ENST00000274071 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.4□□□□□ -0.75
PDGFC-201ENST00000274071 CTAGE9A4FU28 777 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 A6NNZ2 444 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 KIF5CO60282 957 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 GNAT1P11488 350 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 FERP16591 822 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 POLD1P28340 1107 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 ADD1P35611 737 aaKnown RBP10.39□□□□□ -0.75
PDGFC-201ENST00000274071 TUBB8Q3ZCM7 444 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 MTHFD1LQ6UB35 978 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 TRIM42Q8IWZ5 723 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 TC2NQ8N9U0 490 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 CCDC148Q8NFR7 591 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 ATL2Q8NHH9 583 aa10.39□□□□□ -0.75
PDGFC-201ENST00000274071 ZNF473Q8WTR7 871 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms