RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 NMT2O60551 498 aa14.33□□□□□ -0.11
UBXN4-201ENST00000272638 DEXIO95424 95 aa14.33□□□□□ -0.11
UBXN4-201ENST00000272638 DNA2P51530 1060 aa14.33□□□□□ -0.11
UBXN4-201ENST00000272638 ADKP55263 362 aaKnown RBP14.33□□□□□ -0.11
UBXN4-201ENST00000272638 TSGA10IPQ3SY00 556 aa14.33□□□□□ -0.11
UBXN4-201ENST00000272638 ARHGAP29Q52LW3 1261 aa14.33□□□□□ -0.11
UBXN4-201ENST00000272638 KLHL34Q8N239 644 aa14.33□□□□□ -0.11
UBXN4-201ENST00000272638 TDRD7Q8NHU6 1098 aaKnown RBP14.33□□□□□ -0.11
UBXN4-201ENST00000272638 GPKOWQ92917 476 aaPredicted RBP eCLIP14.33□□□□□ -0.112e-6■■■□□ 15.9
UBXN4-201ENST00000272638 NUP88Q99567 741 aaPredicted RBP14.33□□□□□ -0.11
UBXN4-201ENST00000272638 BAZ2BQ9UIF8 2168 aaKnown RBP14.33□□□□□ -0.11
UBXN4-201ENST00000272638 FOXN1O15353 648 aa14.33□□□□□ -0.12
UBXN4-201ENST00000272638 KRT2P35908 639 aa14.33□□□□□ -0.12
UBXN4-201ENST00000272638 SMARCC1Q92922 1105 aaPredicted RBP14.33□□□□□ -0.12
UBXN4-201ENST00000272638 TANGO6Q9C0B7 1094 aa14.33□□□□□ -0.12
UBXN4-201ENST00000272638 MAGEC2Q9UBF1 373 aaPredicted RBP14.33□□□□□ -0.12
UBXN4-201ENST00000272638 EIF5P55010 431 aaKnown RBP14.33□□□□□ -0.12
UBXN4-201ENST00000272638 LRRC8AQ8IWT6 810 aa14.33□□□□□ -0.12
UBXN4-201ENST00000272638 CELF1Q92879 486 aaKnown RBP14.33□□□□□ -0.12
UBXN4-201ENST00000272638 NLRP12P59046 1061 aa14.32□□□□□ -0.12
UBXN4-201ENST00000272638 LONRF3Q496Y0 759 aa14.32□□□□□ -0.12
UBXN4-201ENST00000272638 REREQ9P2R6 1566 aa14.32□□□□□ -0.12
UBXN4-201ENST00000272638 PCDHB6Q9Y5E3 794 aa14.32□□□□□ -0.12
UBXN4-201ENST00000272638 CYP2D6P10635 497 aa14.32□□□□□ -0.12
UBXN4-201ENST00000272638 TFAP4Q01664 338 aa14.32□□□□□ -0.12
UBXN4-201ENST00000272638 CCDC96Q2M329 555 aa14.32□□□□□ -0.12
UBXN4-201ENST00000272638 ATL3Q6DD88 541 aa14.32□□□□□ -0.12
UBXN4-201ENST00000272638 OXER1Q8TDS5 423 aa14.32□□□□□ -0.12
UBXN4-201ENST00000272638 TGFBRAP1Q8WUH2 860 aa14.32□□□□□ -0.12
UBXN4-201ENST00000272638 SMIM22K7EJ46 135 aa14.32□□□□□ -0.12
UBXN4-201ENST00000272638 LDHBP07195 334 aaKnown RBP14.32□□□□□ -0.12
UBXN4-201ENST00000272638 NEMFO60524 1076 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 WDHD1O75717 1129 aaPredicted RBP14.31□□□□□ -0.12
UBXN4-201ENST00000272638 SLC39A14Q15043 492 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 DESI2Q9BSY9 194 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 VPS16Q9H269 839 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 CPVLQ9H3G5 476 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 FER1L4A9Z1Z3 1794 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 USP27XA6NNY8 438 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 POLR3GO15318 223 aaPredicted RBP14.31□□□□□ -0.12
UBXN4-201ENST00000272638 CMA1P23946 247 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 RILPL1Q5EBL4 403 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 PRDX5P30044 214 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.31□□□□□ -0.12
UBXN4-201ENST00000272638 SEC63Q9UGP8 760 aaKnown RBP14.31□□□□□ -0.12
UBXN4-201ENST00000272638 POSTNQ15063 836 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 KIF4BQ2VIQ3 1234 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 CCDC178Q5BJE1 867 aa14.31□□□□□ -0.12
UBXN4-201ENST00000272638 ARGLU1Q9NWB6 273 aaPredicted RBP14.31□□□□□ -0.12
UBXN4-201ENST00000272638 FAM205CA6NFA0 338 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 PLEKHA8P1O95397 391 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 KRT18P05783 430 aaKnown RBP14.3□□□□□ -0.12
UBXN4-201ENST00000272638 KIF5BP33176 963 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 CCDC150Q8NCX0 1101 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 CCDC12Q8WUD4 166 aaPredicted RBP14.3□□□□□ -0.12
UBXN4-201ENST00000272638 KCNB2Q92953 911 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 SOS2Q07890 1332 aaPredicted RBP14.3□□□□□ -0.12
UBXN4-201ENST00000272638 UBN2Q6ZU65 1347 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 CUTAO60888 179 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 BAG3O95817 575 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 STAT6P42226 847 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 ELF2Q15723 593 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 DYNLL2Q96FJ2 89 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 GSG1L2A8MUP6 293 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 FBXO3Q9UK99 471 aa14.3□□□□□ -0.12
UBXN4-201ENST00000272638 ZNF215Q9UL58 517 aaPredicted RBP14.3□□□□□ -0.12
UBXN4-201ENST00000272638 UFL1O94874 794 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 NAPAP54920 295 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 LETM2Q2VYF4 491 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 CAGE1Q8TC20 777 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 EPSTI1Q96J88 318 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 SLC4A9Q96Q91 983 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 POLR3EQ9NVU0 708 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 VIRMAQ69YN4 1812 aaKnown RBP14.29□□□□□ -0.12
UBXN4-201ENST00000272638 MST1RQ04912 1400 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 USP17L8P0C7I0 530 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 FMR1NBQ8N0W7 255 aaPredicted RBP14.29□□□□□ -0.12
UBXN4-201ENST00000272638 ZSCAN10Q96SZ4 725 aaPredicted RBP14.29□□□□□ -0.12
UBXN4-201ENST00000272638 CSRNP2Q9H175 543 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 FAM170AA1A519 330 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 CASQ1P31415 396 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 LRP10Q7Z4F1 713 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 EPB41L4AQ9HCS5 686 aaPredicted RBP14.29□□□□□ -0.12
UBXN4-201ENST00000272638 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
UBXN4-201ENST00000272638 PAXBP1Q9Y5B6 917 aa14.29□□□□□ -0.12
UBXN4-201ENST00000272638 CSF1RP07333 972 aa14.28□□□□□ -0.12
UBXN4-201ENST00000272638 ITPK1Q13572 414 aa14.28□□□□□ -0.12
UBXN4-201ENST00000272638 STIM1Q13586 685 aa14.28□□□□□ -0.12
UBXN4-201ENST00000272638 TTC38Q5R3I4 469 aa14.28□□□□□ -0.12
UBXN4-201ENST00000272638 CNBD1Q8NA66 436 aa14.28□□□□□ -0.12
UBXN4-201ENST00000272638 ZNF622Q969S3 477 aaKnown RBP eCLIP14.28□□□□□ -0.124e-7■■■■□ 20.7
UBXN4-201ENST00000272638 LY9Q9HBG7 655 aa14.28□□□□□ -0.12
UBXN4-201ENST00000272638 HPS5Q9UPZ3 1129 aa14.28□□□□□ -0.12
UBXN4-201ENST00000272638 CTNND2Q9UQB3 1225 aa14.28□□□□□ -0.12
UBXN4-201ENST00000272638 KRBA2Q6ZNG9 492 aa14.28□□□□□ -0.12
UBXN4-201ENST00000272638 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.28□□□□□ -0.12
UBXN4-201ENST00000272638 CRACR2BQ8N4Y2 399 aaPredicted RBP14.28□□□□□ -0.12
UBXN4-201ENST00000272638 TRIM47Q96LD4 638 aa14.28□□□□□ -0.12
UBXN4-201ENST00000272638 ZSCAN12O43309 604 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms