RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 NME2P22392 152 aa5.35□□□□□ -1.55
CDRT1-201ENST00000261644 RING1Q06587 406 aa5.35□□□□□ -1.55
CDRT1-201ENST00000261644 DTHD1Q6ZMT9 781 aa5.35□□□□□ -1.55
CDRT1-201ENST00000261644 CILP2Q8IUL8 1156 aa5.35□□□□□ -1.55
CDRT1-201ENST00000261644 KSR1Q8IVT5 923 aa5.35□□□□□ -1.55
CDRT1-201ENST00000261644 SULF2Q8IWU5 870 aa5.35□□□□□ -1.55
CDRT1-201ENST00000261644 HEXIM2Q96MH2 286 aaKnown RBP5.35□□□□□ -1.55
CDRT1-201ENST00000261644 SLC38A3Q99624 504 aa5.35□□□□□ -1.55
CDRT1-201ENST00000261644 PPP4R2Q9NY27 417 aa5.35□□□□□ -1.55
CDRT1-201ENST00000261644 GTF2IRD1Q9UHL9 959 aa5.35□□□□□ -1.55
CDRT1-201ENST00000261644 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.34□□□□□ -1.55
CDRT1-201ENST00000261644 CARNS1A5YM72 827 aa5.34□□□□□ -1.55
CDRT1-201ENST00000261644 RNGTTO60942 597 aaKnown RBP5.34□□□□□ -1.55
CDRT1-201ENST00000261644 ARNTP27540 789 aa5.34□□□□□ -1.55
CDRT1-201ENST00000261644 NTF4P34130 210 aa5.34□□□□□ -1.55
CDRT1-201ENST00000261644 CLCN7P51798 805 aa5.34□□□□□ -1.55
CDRT1-201ENST00000261644 ARHGAP27Q6ZUM4 889 aa5.34□□□□□ -1.55
CDRT1-201ENST00000261644 C22orf34Q6ZV56 151 aa5.34□□□□□ -1.55
CDRT1-201ENST00000261644 ZSWIM9Q86XI8 627 aa5.34□□□□□ -1.55
CDRT1-201ENST00000261644 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.34□□□□□ -1.55
CDRT1-201ENST00000261644 SPACA3Q8IXA5 215 aa5.34□□□□□ -1.55
CDRT1-201ENST00000261644 TOP6BLQ8N6T0 577 aa5.34□□□□□ -1.55
CDRT1-201ENST00000261644 EPS8L3Q8TE67 593 aaKnown RBP5.34□□□□□ -1.55
CDRT1-201ENST00000261644 ZC3H12CQ9C0D7 883 aaKnown RBP5.34□□□□□ -1.55
CDRT1-201ENST00000261644 NIF3L1Q9GZT8 377 aa5.34□□□□□ -1.55
CDRT1-201ENST00000261644 LMCD1Q9NZU5 365 aa5.34□□□□□ -1.55
CDRT1-201ENST00000261644 GPN3Q9UHW5 284 aaPredicted RBP5.34□□□□□ -1.55
CDRT1-201ENST00000261644 TOP2BQ02880 1626 aa5.34□□□□□ -1.56
CDRT1-201ENST00000261644 PDIA4P13667 645 aaKnown RBP5.33□□□□□ -1.56
CDRT1-201ENST00000261644 CD96P40200 585 aa5.33□□□□□ -1.56
CDRT1-201ENST00000261644 ZNF124Q15973 351 aa5.33□□□□□ -1.56
CDRT1-201ENST00000261644 KCNB2Q92953 911 aa5.33□□□□□ -1.56
CDRT1-201ENST00000261644 PRDM10Q9NQV6 1147 aa5.33□□□□□ -1.56
CDRT1-201ENST00000261644 NLRP2Q9NX02 1062 aa5.33□□□□□ -1.56
CDRT1-201ENST00000261644 SUPT16HQ9Y5B9 1047 aaKnown RBP5.33□□□□□ -1.56
CDRT1-201ENST00000261644 PITPNM2Q9BZ72 1349 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 CCER2I3L3R5 266 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 FANCGO15287 622 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 TRIM37O94972 964 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 TSPAN15O95858 294 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 ZNF157P51786 506 aaPredicted RBP5.32□□□□□ -1.56
CDRT1-201ENST00000261644 FCGRTP55899 365 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 NKPD1Q17RQ9 610 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 ERICH6BQ5W0A0 696 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 KCT2Q8NC54 265 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 STK35Q8TDR2 534 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 PPP1R16BQ96T49 567 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 BCO2Q9BYV7 579 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 SRCIN1Q9C0H9 1055 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 PPM1HQ9ULR3 514 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 CTNND2Q9UQB3 1225 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 MAPK8IP1Q9UQF2 711 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 BIVM-ERCC5R4GMW8 1640 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 SYNJ1O43426 1573 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 ATAD2BQ9ULI0 1458 aa5.32□□□□□ -1.56
CDRT1-201ENST00000261644 ZNF503-AS2A6NEH8 195 aa5.31□□□□□ -1.56
CDRT1-201ENST00000261644 C3orf58Q8NDZ4 430 aa5.31□□□□□ -1.56
CDRT1-201ENST00000261644 GPBAR1Q8TDU6 330 aa5.31□□□□□ -1.56
CDRT1-201ENST00000261644 NECAB3Q96P71 396 aaPredicted RBP5.31□□□□□ -1.56
CDRT1-201ENST00000261644 ANP32EQ9BTT0 268 aa5.31□□□□□ -1.56
CDRT1-201ENST00000261644 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.31□□□□□ -1.56
CDRT1-201ENST00000261644 UNC13AQ9UPW8 1703 aa5.31□□□□□ -1.56
CDRT1-201ENST00000261644 BICRAQ9NZM4 1560 aa5.3□□□□□ -1.56
CDRT1-201ENST00000261644 LRRC10BA6NIK2 292 aa5.3□□□□□ -1.56
CDRT1-201ENST00000261644 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.3□□□□□ -1.56
CDRT1-201ENST00000261644 ITIH2P19823 946 aa5.3□□□□□ -1.56
CDRT1-201ENST00000261644 CAP2P40123 477 aa5.3□□□□□ -1.56
CDRT1-201ENST00000261644 AFMP43652 599 aa5.3□□□□□ -1.56
CDRT1-201ENST00000261644 ZP2Q05996 745 aa5.3□□□□□ -1.56
CDRT1-201ENST00000261644 DSC3Q14574 896 aa5.3□□□□□ -1.56
CDRT1-201ENST00000261644 KCNMB1Q16558 191 aa5.3□□□□□ -1.56
CDRT1-201ENST00000261644 MAP1SQ66K74 1059 aaPredicted RBP5.3□□□□□ -1.56
CDRT1-201ENST00000261644 CEP44Q9C0F1 390 aa5.3□□□□□ -1.56
CDRT1-201ENST00000261644 SSU72Q9NP77 194 aaKnown RBP5.3□□□□□ -1.56
CDRT1-201ENST00000261644 SAMM50Q9Y512 469 aa5.3□□□□□ -1.56
CDRT1-201ENST00000261644 RAPGEF2Q9Y4G8 1499 aa5.3□□□□□ -1.56
CDRT1-201ENST00000261644 PATL2C9JE40 543 aaKnown RBP5.29□□□□□ -1.56
CDRT1-201ENST00000261644 EOMESO95936 686 aa5.29□□□□□ -1.56
CDRT1-201ENST00000261644 ZNF865P0CJ78 1059 aaPredicted RBP5.29□□□□□ -1.56
CDRT1-201ENST00000261644 IKZF1Q13422 519 aa5.29□□□□□ -1.56
CDRT1-201ENST00000261644 ENOX2Q16206 610 aaKnown RBP5.29□□□□□ -1.56
CDRT1-201ENST00000261644 ZBTB37Q5TC79 503 aa5.29□□□□□ -1.56
CDRT1-201ENST00000261644 TMC1Q8TDI8 760 aa5.29□□□□□ -1.56
CDRT1-201ENST00000261644 FBF1Q8TES7 1133 aa5.29□□□□□ -1.56
CDRT1-201ENST00000261644 TOX2Q96NM4 488 aa5.29□□□□□ -1.56
CDRT1-201ENST00000261644 GNAT3A8MTJ3 354 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 ENC1O14682 589 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 LRIG2O94898 1065 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 GLI1P08151 1106 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 BMP6P22004 513 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 GSTT1P30711 240 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 TMC7Q7Z402 723 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 C1QL4Q86Z23 238 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 SIAH1Q8IUQ4 282 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 RETREG2Q8NC44 543 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 FOXQ1Q9C009 403 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 PRDM5Q9NQX1 630 aaPredicted RBP5.28□□□□□ -1.56
CDRT1-201ENST00000261644 RAPGEFL1Q9UHV5 662 aa5.28□□□□□ -1.56
CDRT1-201ENST00000261644 CCNB3Q8WWL7 1395 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms