RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 AEBP2Q6ZN18 517 aaPredicted RBP20.66■□□□□ 0.9
CDRT1-201ENST00000261644 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
CDRT1-201ENST00000261644 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
CDRT1-201ENST00000261644 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
CDRT1-201ENST00000261644 FOXD1Q16676 465 aa16.43■□□□□ 0.22
CDRT1-201ENST00000261644 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
CDRT1-201ENST00000261644 MSH5O43196 834 aa15.47■□□□□ 0.07
CDRT1-201ENST00000261644 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.04
CDRT1-201ENST00000261644 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
CDRT1-201ENST00000261644 ADRA2BP18089 450 aa15.24■□□□□ 0.03
CDRT1-201ENST00000261644 POTEDQ86YR6 584 aa15.02■□□□□ -0
CDRT1-201ENST00000261644 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
CDRT1-201ENST00000261644 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
CDRT1-201ENST00000261644 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
CDRT1-201ENST00000261644 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
CDRT1-201ENST00000261644 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
CDRT1-201ENST00000261644 CNKSR2Q8WXI2 1034 aa13.53□□□□□ -0.24
CDRT1-201ENST00000261644 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
CDRT1-201ENST00000261644 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
CDRT1-201ENST00000261644 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
CDRT1-201ENST00000261644 DNAJC5BQ9UF47 199 aa13.21□□□□□ -0.29
CDRT1-201ENST00000261644 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
CDRT1-201ENST00000261644 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
CDRT1-201ENST00000261644 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
CDRT1-201ENST00000261644 C1QBPQ07021 282 aaKnown RBP13.01□□□□□ -0.33
CDRT1-201ENST00000261644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDRT1-201ENST00000261644 KCNA4P22459 653 aa12.72□□□□□ -0.37
CDRT1-201ENST00000261644 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-201ENST00000261644 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
CDRT1-201ENST00000261644 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
CDRT1-201ENST00000261644 DSG3P32926 999 aa12.3□□□□□ -0.44
CDRT1-201ENST00000261644 APLP2Q06481 763 aa12.3□□□□□ -0.44
CDRT1-201ENST00000261644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.29□□□□□ -0.44
CDRT1-201ENST00000261644 CAPN15O75808 1086 aa12.29□□□□□ -0.44
CDRT1-201ENST00000261644 HNRNPUL2Q1KMD3 747 aaKnown RBP12.29□□□□□ -0.44
CDRT1-201ENST00000261644 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
CDRT1-201ENST00000261644 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
CDRT1-201ENST00000261644 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
CDRT1-201ENST00000261644 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
CDRT1-201ENST00000261644 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
CDRT1-201ENST00000261644 ABCB7O75027 752 aa11.97□□□□□ -0.49
CDRT1-201ENST00000261644 FOXD4L1Q9NU39 408 aa11.94□□□□□ -0.5
CDRT1-201ENST00000261644 RBM42Q9BTD8 480 aaKnown RBP11.8□□□□□ -0.52
CDRT1-201ENST00000261644 POLA2Q14181 598 aa11.79□□□□□ -0.52
CDRT1-201ENST00000261644 POTEHQ6S545 545 aa11.77□□□□□ -0.53
CDRT1-201ENST00000261644 ZBTB22O15209 634 aa11.7□□□□□ -0.54
CDRT1-201ENST00000261644 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
CDRT1-201ENST00000261644 ZBTB12Q9Y330 459 aaPredicted RBP11.68□□□□□ -0.54
CDRT1-201ENST00000261644 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
CDRT1-201ENST00000261644 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
CDRT1-201ENST00000261644 CHRDL2Q6WN34 429 aa11.48□□□□□ -0.57
CDRT1-201ENST00000261644 OSCARQ8IYS5 282 aa11.42□□□□□ -0.58
CDRT1-201ENST00000261644 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
CDRT1-201ENST00000261644 FBLN2P98095 1184 aa11.32□□□□□ -0.6
CDRT1-201ENST00000261644 SPDYE2BA6NHP3 402 aa11.29□□□□□ -0.6
CDRT1-201ENST00000261644 SPDYE6P0CI01 402 aa11.29□□□□□ -0.6
CDRT1-201ENST00000261644 SPDYE2Q495Y8 402 aa11.29□□□□□ -0.6
CDRT1-201ENST00000261644 PITPNM1O00562 1244 aa11.22□□□□□ -0.61
CDRT1-201ENST00000261644 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
CDRT1-201ENST00000261644 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
CDRT1-201ENST00000261644 FXR2P51116 673 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDRT1-201ENST00000261644 CSRNP3Q8WYN3 585 aa11.16□□□□□ -0.62
CDRT1-201ENST00000261644 SSUH2Q9Y2M2 353 aa11.15□□□□□ -0.62
CDRT1-201ENST00000261644 SPDYE1Q8NFV5 336 aaPredicted RBP11.07□□□□□ -0.64
CDRT1-201ENST00000261644 ZNF692Q9BU19 519 aaPredicted RBP11.06□□□□□ -0.64
CDRT1-201ENST00000261644 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
CDRT1-201ENST00000261644 HAX1O00165 279 aa10.93□□□□□ -0.66
CDRT1-201ENST00000261644 CLEC11AQ9Y240 323 aa10.93□□□□□ -0.66
CDRT1-201ENST00000261644 PRKAR2AP13861 404 aaKnown RBP10.9□□□□□ -0.66
CDRT1-201ENST00000261644 PABPN1Q86U42 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDRT1-201ENST00000261644 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.66
CDRT1-201ENST00000261644 C19orf67A6NJJ6 358 aa10.81□□□□□ -0.68
CDRT1-201ENST00000261644 PRR29P0C7W0 189 aa10.81□□□□□ -0.68
CDRT1-201ENST00000261644 EVX2Q03828 476 aa10.79□□□□□ -0.68
CDRT1-201ENST00000261644 CHADLQ6NUI6 762 aa10.72□□□□□ -0.69
CDRT1-201ENST00000261644 STAG3Q9UJ98 1225 aa10.7□□□□□ -0.7
CDRT1-201ENST00000261644 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
CDRT1-201ENST00000261644 FARP1Q9Y4F1 1045 aaPredicted RBP10.65□□□□□ -0.7
CDRT1-201ENST00000261644 CLCN6P51797 869 aa10.61□□□□□ -0.71
CDRT1-201ENST00000261644 GABBR2O75899 941 aa10.6□□□□□ -0.71
CDRT1-201ENST00000261644 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
CDRT1-201ENST00000261644 CREBZFQ9NS37 354 aa10.57□□□□□ -0.72
CDRT1-201ENST00000261644 PROM2Q8N271 834 aa10.54□□□□□ -0.72
CDRT1-201ENST00000261644 ZNF579Q8NAF0 562 aaKnown RBP10.48□□□□□ -0.73
CDRT1-201ENST00000261644 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
CDRT1-201ENST00000261644 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
CDRT1-201ENST00000261644 ZRANB1Q9UGI0 708 aa10.39□□□□□ -0.75
CDRT1-201ENST00000261644 POTEIP0CG38 1075 aa10.38□□□□□ -0.75
CDRT1-201ENST00000261644 PAK3O75914 559 aaPredicted RBP10.35□□□□□ -0.75
CDRT1-201ENST00000261644 LHX8Q68G74 356 aa10.33□□□□□ -0.76
CDRT1-201ENST00000261644 DCBLD2Q96PD2 775 aa10.29□□□□□ -0.76
CDRT1-201ENST00000261644 GALR2O43603 387 aaPredicted RBP10.26□□□□□ -0.77
CDRT1-201ENST00000261644 PHF12Q96QT6 1004 aa10.23□□□□□ -0.77
CDRT1-201ENST00000261644 PLEKHG5O94827 1062 aa10.19□□□□□ -0.78
CDRT1-201ENST00000261644 CCDC61Q9Y6R9 512 aa10.17□□□□□ -0.78
CDRT1-201ENST00000261644 ASTLQ6HA08 431 aaPredicted RBP10.14□□□□□ -0.79
CDRT1-201ENST00000261644 MIER1Q8N108 512 aa10.13□□□□□ -0.79
CDRT1-201ENST00000261644 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
CDRT1-201ENST00000261644 ZBTB47Q9UFB7 747 aaPredicted RBP10.11□□□□□ -0.79
CDRT1-201ENST00000261644 KIF12Q96FN5 646 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms