RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 TBC1D9Q6ZT07 1266 aa22.77■■□□□ 1.24
KHDC1-201ENST00000257765 PXYLP1Q8TE99 480 aa22.77■■□□□ 1.24
KHDC1-201ENST00000257765 SIPA1L1O43166 1804 aa22.76■■□□□ 1.23
KHDC1-201ENST00000257765 FARP2O94887 1054 aaPredicted RBP22.76■■□□□ 1.23
KHDC1-201ENST00000257765 INHAP05111 366 aa22.76■■□□□ 1.23
KHDC1-201ENST00000257765 TRIM27P14373 513 aa22.76■■□□□ 1.23
KHDC1-201ENST00000257765 ELNP15502 786 aa22.76■■□□□ 1.23
KHDC1-201ENST00000257765 G3BP1Q13283 466 aaKnown RBP eCLIP22.76■■□□□ 1.23
KHDC1-201ENST00000257765 IRF5Q13568 498 aa22.76■■□□□ 1.23
KHDC1-201ENST00000257765 TREML2Q5T2D2 321 aa22.76■■□□□ 1.23
KHDC1-201ENST00000257765 ANKRD13CQ8N6S4 541 aa22.76■■□□□ 1.23
KHDC1-201ENST00000257765 PROCA1Q8NCQ7 364 aaPredicted RBP22.76■■□□□ 1.23
KHDC1-201ENST00000257765 CDK5RAP2Q96SN8 1893 aa22.76■■□□□ 1.23
KHDC1-201ENST00000257765 PNMA6EA0A0J9YXQ4 647 aa22.75■■□□□ 1.23
KHDC1-201ENST00000257765 UQCRFS1P1P0C7P4 283 aa22.75■■□□□ 1.23
KHDC1-201ENST00000257765 MCAMP43121 646 aa22.75■■□□□ 1.23
KHDC1-201ENST00000257765 FAM110CQ1W6H9 321 aa22.75■■□□□ 1.23
KHDC1-201ENST00000257765 ATF7IPQ6VMQ6 1270 aa22.75■■□□□ 1.23
KHDC1-201ENST00000257765 TEX11Q8IYF3 940 aa22.75■■□□□ 1.23
KHDC1-201ENST00000257765 COA7Q96BR5 231 aa22.75■■□□□ 1.23
KHDC1-201ENST00000257765 TBC1D2Q9BYX2 928 aa22.75■■□□□ 1.23
KHDC1-201ENST00000257765 FOCADQ5VW36 1801 aa22.75■■□□□ 1.23
KHDC1-201ENST00000257765 SGPL1O95470 568 aa22.74■■□□□ 1.23
KHDC1-201ENST00000257765 SPP2Q13103 211 aa22.74■■□□□ 1.23
KHDC1-201ENST00000257765 ZNF280CQ8ND82 737 aa22.74■■□□□ 1.23
KHDC1-201ENST00000257765 LRP2BPQ9P2M1 347 aa22.74■■□□□ 1.23
KHDC1-201ENST00000257765 TNNQ9UQP3 1299 aa22.74■■□□□ 1.23
KHDC1-201ENST00000257765 CCER2I3L3R5 266 aa22.73■■□□□ 1.23
KHDC1-201ENST00000257765 CAP2P40123 477 aa22.73■■□□□ 1.23
KHDC1-201ENST00000257765 FRAT1Q92837 279 aaPredicted RBP22.73■■□□□ 1.23
KHDC1-201ENST00000257765 NOL10Q9BSC4 688 aaKnown RBP22.73■■□□□ 1.23
KHDC1-201ENST00000257765 TAOK2Q9UL54 1235 aa22.73■■□□□ 1.23
KHDC1-201ENST00000257765 HMGCS2P54868 508 aa22.72■■□□□ 1.23
KHDC1-201ENST00000257765 PABPC4Q13310 644 aaKnown RBP eCLIP22.72■■□□□ 1.23
KHDC1-201ENST00000257765 HERC5Q9UII4 1024 aaKnown RBP22.72■■□□□ 1.23
KHDC1-201ENST00000257765 MYO5AQ9Y4I1 1855 aaKnown RBP22.72■■□□□ 1.23
KHDC1-201ENST00000257765 USP17L5A8MUK1 530 aa22.71■■□□□ 1.23
KHDC1-201ENST00000257765 CAPN2P17655 700 aa22.71■■□□□ 1.23
KHDC1-201ENST00000257765 GCLCP48506 637 aaPredicted RBP22.71■■□□□ 1.23
KHDC1-201ENST00000257765 SH3RF3Q8TEJ3 882 aaPredicted RBP22.71■■□□□ 1.23
KHDC1-201ENST00000257765 CLUAP1Q96AJ1 413 aa22.71■■□□□ 1.23
KHDC1-201ENST00000257765 AS3MTQ9HBK9 375 aa22.71■■□□□ 1.23
KHDC1-201ENST00000257765 RBM27Q9P2N5 1060 aaKnown RBP22.71■■□□□ 1.23
KHDC1-201ENST00000257765 NR2E3Q9Y5X4 410 aa22.71■■□□□ 1.23
KHDC1-201ENST00000257765 BCAR3O75815 825 aa22.7■■□□□ 1.22
KHDC1-201ENST00000257765 RRP1BQ14684 758 aaKnown RBP22.7■■□□□ 1.22
KHDC1-201ENST00000257765 NAA16Q6N069 864 aaPredicted RBP22.7■■□□□ 1.22
KHDC1-201ENST00000257765 DEFB118Q96PH6 123 aa22.7■■□□□ 1.22
KHDC1-201ENST00000257765 PAK6Q9NQU5 681 aaPredicted RBP22.7■■□□□ 1.22
KHDC1-201ENST00000257765 BAG3O95817 575 aa22.69■■□□□ 1.22
KHDC1-201ENST00000257765 PLCG2P16885 1265 aa22.69■■□□□ 1.22
KHDC1-201ENST00000257765 SH3D19Q5HYK7 790 aa22.69■■□□□ 1.22
KHDC1-201ENST00000257765 TTC39AQ5SRH9 613 aa22.69■■□□□ 1.22
KHDC1-201ENST00000257765 DHX36Q9H2U1 1008 aaKnown RBP22.69■■□□□ 1.22
KHDC1-201ENST00000257765 GPR108Q9NPR9 543 aa22.69■■□□□ 1.22
KHDC1-201ENST00000257765 AATFQ9NY61 560 aaKnown RBP eCLIP22.69■■□□□ 1.22
KHDC1-201ENST00000257765 PI4KBQ9UBF8 816 aa22.69■■□□□ 1.22
KHDC1-201ENST00000257765 ALPK3Q96L96 1907 aa22.69■■□□□ 1.22
KHDC1-201ENST00000257765 TFRCP02786 760 aaKnown RBP22.68■■□□□ 1.22
KHDC1-201ENST00000257765 TNNI3KQ59H18 835 aa22.68■■□□□ 1.22
KHDC1-201ENST00000257765 ASCC2Q9H1I8 757 aaPredicted RBP22.68■■□□□ 1.22
KHDC1-201ENST00000257765 SNRKQ9NRH2 765 aa22.68■■□□□ 1.22
KHDC1-201ENST00000257765 FPGT-TNNI3KV9GXZ4 949 aa22.68■■□□□ 1.22
KHDC1-201ENST00000257765 PLXNB2O15031 1838 aa22.68■■□□□ 1.22
KHDC1-201ENST00000257765 ZBTB7BO15156 539 aaPredicted RBP22.67■■□□□ 1.22
KHDC1-201ENST00000257765 OS9Q13438 667 aaPredicted RBP22.67■■□□□ 1.22
KHDC1-201ENST00000257765 CCDC158Q5M9N0 1113 aa22.67■■□□□ 1.22
KHDC1-201ENST00000257765 TMEM57Q8N5G2 664 aa22.67■■□□□ 1.22
KHDC1-201ENST00000257765 DBNDD2Q9BQY9 259 aa22.67■■□□□ 1.22
KHDC1-201ENST00000257765 FLT1P17948 1338 aa22.66■■□□□ 1.22
KHDC1-201ENST00000257765 HMGCRP04035 888 aa22.66■■□□□ 1.22
KHDC1-201ENST00000257765 POLA2Q14181 598 aa22.66■■□□□ 1.22
KHDC1-201ENST00000257765 WDR18Q9BV38 432 aa22.66■■□□□ 1.22
KHDC1-201ENST00000257765 CRISPLD2Q9H0B8 497 aa22.66■■□□□ 1.22
KHDC1-201ENST00000257765 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.66■■□□□ 1.22
KHDC1-201ENST00000257765 PRO3102Q9H379 93 aa22.66■■□□□ 1.22
KHDC1-201ENST00000257765 EVI5O60447 810 aa22.65■■□□□ 1.22
KHDC1-201ENST00000257765 ASNSP08243 561 aa22.65■■□□□ 1.22
KHDC1-201ENST00000257765 PPP4CP60510 307 aa22.65■■□□□ 1.22
KHDC1-201ENST00000257765 IRX3P78415 501 aaPredicted RBP22.65■■□□□ 1.22
KHDC1-201ENST00000257765 MTMR2Q13614 643 aa22.65■■□□□ 1.22
KHDC1-201ENST00000257765 ZKSCAN2Q63HK3 967 aa22.65■■□□□ 1.22
KHDC1-201ENST00000257765 MAPKAPK5Q8IW41 473 aa22.65■■□□□ 1.22
KHDC1-201ENST00000257765 TGFBRAP1Q8WUH2 860 aa22.65■■□□□ 1.22
KHDC1-201ENST00000257765 TRIM34Q9BYJ4 488 aa22.65■■□□□ 1.22
KHDC1-201ENST00000257765 BACE1P56817 501 aa22.64■■□□□ 1.21
KHDC1-201ENST00000257765 ADGRA1Q86SQ6 560 aa22.64■■□□□ 1.21
KHDC1-201ENST00000257765 CRACR2BQ8N4Y2 399 aaPredicted RBP22.64■■□□□ 1.21
KHDC1-201ENST00000257765 SSH3Q8TE77 659 aa22.64■■□□□ 1.21
KHDC1-201ENST00000257765 DNAJC18Q9H819 358 aa22.64■■□□□ 1.21
KHDC1-201ENST00000257765 TMOD4Q9NZQ9 345 aa22.64■■□□□ 1.21
KHDC1-201ENST00000257765 MORF4L1Q9UBU8 362 aa22.64■■□□□ 1.21
KHDC1-201ENST00000257765 MYH1P12882 1939 aa22.64■■□□□ 1.21
KHDC1-201ENST00000257765 IGSF3O75054 1194 aa22.63■■□□□ 1.21
KHDC1-201ENST00000257765 CYP2E1P05181 493 aaPredicted RBP22.63■■□□□ 1.21
KHDC1-201ENST00000257765 SURF6O75683 361 aaKnown RBP22.62■■□□□ 1.21
KHDC1-201ENST00000257765 ATP8B2P98198 1209 aa22.62■■□□□ 1.21
KHDC1-201ENST00000257765 METTL16Q86W50 562 aaKnown RBP22.62■■□□□ 1.21
KHDC1-201ENST00000257765 FOXP4Q8IVH2 680 aaPredicted RBP22.62■■□□□ 1.21
KHDC1-201ENST00000257765 PAWRQ96IZ0 340 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms