RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 LRRC24Q50LG9 513 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 IFT74Q96LB3 600 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.48■□□□□ 0.87
EFR3A-201ENST00000254624 ATG3Q9NT62 314 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 BCAMP50895 628 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 ZNF804BA4D1E1 1349 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 CALUO43852 315 aaPredicted RBP20.48■□□□□ 0.87
EFR3A-201ENST00000254624 TXKP42681 527 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 FAM212AQ96EL1 285 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 SRRTQ9BXP5 876 aaKnown RBP20.48■□□□□ 0.87
EFR3A-201ENST00000254624 GREM2Q9H772 168 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 USP17L12C9JPN9 530 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 USP17L21D6R901 530 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 ZYXQ15942 572 aaKnown RBP20.48■□□□□ 0.87
EFR3A-201ENST00000254624 ZSCAN10Q96SZ4 725 aaPredicted RBP20.48■□□□□ 0.87
EFR3A-201ENST00000254624 PKD2L1Q9P0L9 805 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 IFNKQ9P0W0 207 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 CLSTN2Q9H4D0 955 aa20.48■□□□□ 0.87
EFR3A-201ENST00000254624 TRAF5O00463 557 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 TRIM14Q14142 442 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 MSL1Q68DK7 614 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 UNC5CLQ8IV45 518 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 LRWD1Q9UFC0 647 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 NCAPD2Q15021 1401 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 FSD2A1L4K1 749 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 HEG1Q9ULI3 1381 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 ARHGEF35A5YM69 484 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 TUBB4BP68371 445 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 ZNF654Q8IZM8 581 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 MYL10Q9BUA6 226 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 PNMA2Q9UL42 364 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 STAP2Q9UGK3 403 aa20.47■□□□□ 0.87
EFR3A-201ENST00000254624 ADGRL3Q9HAR2 1447 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 ZNF853P0CG23 659 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 PTGS1P23219 599 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 RXRBP28702 533 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 LMAN1P49257 510 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 NOLC1Q14978 699 aaKnown RBP eCLIP20.46■□□□□ 0.87
EFR3A-201ENST00000254624 CTAGE9A4FU28 777 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 CHMP2AO43633 222 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 GTF3C6Q969F1 213 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 BCCIPQ9P287 314 aaKnown RBP eCLIP20.46■□□□□ 0.87
EFR3A-201ENST00000254624 PROSER3Q2NL68 480 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 VWA3BQ502W6 1294 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 HS1BP3Q53T59 392 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 DCAF15Q66K64 600 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 CEP112Q8N8E3 955 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 PHKBQ93100 1093 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 FAM47AQ5JRC9 791 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 ATP8A2Q9NTI2 1148 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 CTNND2Q9UQB3 1225 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 SPATA31A3Q5VYP0 1347 aa20.46■□□□□ 0.87
EFR3A-201ENST00000254624 A0A0D9SFI3 127 aa20.45■□□□□ 0.86
EFR3A-201ENST00000254624 CALCRLQ16602 461 aa20.45■□□□□ 0.86
EFR3A-201ENST00000254624 REXO1Q8N1G1 1221 aaKnown RBP20.45■□□□□ 0.86
EFR3A-201ENST00000254624 UNC13BO14795 1591 aa20.45■□□□□ 0.86
EFR3A-201ENST00000254624 FNBP1Q96RU3 617 aa20.45■□□□□ 0.86
EFR3A-201ENST00000254624 DNAI1Q9UI46 699 aa20.45■□□□□ 0.86
EFR3A-201ENST00000254624 HSPD1P10809 573 aaKnown RBP20.45■□□□□ 0.86
EFR3A-201ENST00000254624 MYCLP12524 364 aaPredicted RBP20.45■□□□□ 0.86
EFR3A-201ENST00000254624 GSPT1P15170 499 aaKnown RBP20.45■□□□□ 0.86
EFR3A-201ENST00000254624 WDR44Q5JSH3 913 aa20.45■□□□□ 0.86
EFR3A-201ENST00000254624 NCAPH2Q6IBW4 605 aa20.45■□□□□ 0.86
EFR3A-201ENST00000254624 MLKLQ8NB16 471 aa20.45■□□□□ 0.86
EFR3A-201ENST00000254624 TSGA10Q9BZW7 698 aa20.45■□□□□ 0.86
EFR3A-201ENST00000254624 PPEF1O14829 653 aaPredicted RBP20.45■□□□□ 0.86
EFR3A-201ENST00000254624 ARID5AQ03989 594 aa20.45■□□□□ 0.86
EFR3A-201ENST00000254624 KRT27Q7Z3Y8 459 aa20.45■□□□□ 0.86
EFR3A-201ENST00000254624 LEO1Q8WVC0 666 aaPredicted RBP20.45■□□□□ 0.86
EFR3A-201ENST00000254624 RRP9O43818 475 aaKnown RBP20.44■□□□□ 0.86
EFR3A-201ENST00000254624 CTR9Q6PD62 1173 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 SNX29Q8TEQ0 813 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 BCS1LQ9Y276 419 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 ZNF335Q9H4Z2 1342 aaPredicted RBP20.44■□□□□ 0.86
EFR3A-201ENST00000254624 NOP56O00567 594 aaKnown RBP20.44■□□□□ 0.86
EFR3A-201ENST00000254624 BRINP3Q76B58 766 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 EDC3Q96F86 508 aaKnown RBP20.44■□□□□ 0.86
EFR3A-201ENST00000254624 NOC4LQ9BVI4 516 aaKnown RBP20.44■□□□□ 0.86
EFR3A-201ENST00000254624 ZNF408Q9H9D4 720 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 DNM3Q9UQ16 869 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 XRCC6P12956 609 aaKnown RBP eCLIP20.44■□□□□ 0.86
EFR3A-201ENST00000254624 STRN3Q13033 797 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 DCAF17Q5H9S7 520 aaPredicted RBP20.44■□□□□ 0.86
EFR3A-201ENST00000254624 KCNG1Q9UIX4 513 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 CLTCL1P53675 1640 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 BTDP43251 543 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.44■□□□□ 0.86
EFR3A-201ENST00000254624 MAATS1Q7Z4T9 603 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 IKBKGQ9Y6K9 419 aa20.44■□□□□ 0.86
EFR3A-201ENST00000254624 MED23Q9ULK4 1368 aa20.43■□□□□ 0.86
EFR3A-201ENST00000254624 BBOX1O75936 387 aa20.43■□□□□ 0.86
EFR3A-201ENST00000254624 CDAN1Q8IWY9 1227 aa20.43■□□□□ 0.86
EFR3A-201ENST00000254624 CSADQ9Y600 493 aa20.43■□□□□ 0.86
EFR3A-201ENST00000254624 POLR2DO15514 142 aaKnown RBP20.43■□□□□ 0.86
EFR3A-201ENST00000254624 DDAH1O94760 285 aa20.43■□□□□ 0.86
EFR3A-201ENST00000254624 IRX3P78415 501 aaPredicted RBP20.43■□□□□ 0.86
EFR3A-201ENST00000254624 MAP3K9P80192 1104 aa20.43■□□□□ 0.86
EFR3A-201ENST00000254624 KIFAP3Q92845 792 aa20.43■□□□□ 0.86
EFR3A-201ENST00000254624 CCDC169A6NNP5 214 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms