RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.33■□□□□ 0.68
ACTN4-201ENST00000252699 PKP1Q13835 747 aa19.33■□□□□ 0.68
ACTN4-201ENST00000252699 CMTR1Q8N1G2 835 aaKnown RBP19.33■□□□□ 0.68
ACTN4-201ENST00000252699 RGS12O14924 1447 aa19.33■□□□□ 0.68
ACTN4-201ENST00000252699 IQGAP1P46940 1657 aa19.32■□□□□ 0.68
ACTN4-201ENST00000252699 M0R2C6 588 aa19.32■□□□□ 0.68
ACTN4-201ENST00000252699 ERLIN1O75477 346 aa19.32■□□□□ 0.68
ACTN4-201ENST00000252699 TNNT3P45378 269 aaPredicted RBP19.32■□□□□ 0.68
ACTN4-201ENST00000252699 PPEF1O14829 653 aaPredicted RBP19.32■□□□□ 0.68
ACTN4-201ENST00000252699 ARID4AP29374 1257 aaPredicted RBP19.32■□□□□ 0.68
ACTN4-201ENST00000252699 CD2BP2O95400 341 aaKnown RBP19.32■□□□□ 0.68
ACTN4-201ENST00000252699 ATP8A2Q9NTI2 1148 aa19.32■□□□□ 0.68
ACTN4-201ENST00000252699 MTMR6Q9Y217 621 aa19.32■□□□□ 0.68
ACTN4-201ENST00000252699 BCS1LQ9Y276 419 aa19.32■□□□□ 0.68
ACTN4-201ENST00000252699 ATP10DQ9P241 1426 aa19.31■□□□□ 0.68
ACTN4-201ENST00000252699 CUTAO60888 179 aa19.31■□□□□ 0.68
ACTN4-201ENST00000252699 USP8P40818 1118 aa19.31■□□□□ 0.68
ACTN4-201ENST00000252699 SSR1P43307 286 aaKnown RBP19.31■□□□□ 0.68
ACTN4-201ENST00000252699 SPECC1Q5M775 1068 aa19.31■□□□□ 0.68
ACTN4-201ENST00000252699 PUS7LQ9H0K6 701 aaKnown RBP19.31■□□□□ 0.68
ACTN4-201ENST00000252699 PICK1Q9NRD5 415 aa19.31■□□□□ 0.68
ACTN4-201ENST00000252699 NARFQ9UHQ1 456 aa19.31■□□□□ 0.68
ACTN4-201ENST00000252699 PDIA3P30101 505 aaKnown RBP19.31■□□□□ 0.68
ACTN4-201ENST00000252699 NAP1L4Q99733 375 aaKnown RBP19.31■□□□□ 0.68
ACTN4-201ENST00000252699 ISCA1Q9BUE6 129 aa19.31■□□□□ 0.68
ACTN4-201ENST00000252699 ERLIN2O94905 339 aa19.31■□□□□ 0.68
ACTN4-201ENST00000252699 SKILP12757 684 aa19.31■□□□□ 0.68
ACTN4-201ENST00000252699 RASGRF1Q13972 1273 aa19.31■□□□□ 0.68
ACTN4-201ENST00000252699 MYSM1Q5VVJ2 828 aa19.31■□□□□ 0.68
ACTN4-201ENST00000252699 CASQ1P31415 396 aa19.3■□□□□ 0.68
ACTN4-201ENST00000252699 NONOQ15233 471 aaKnown RBP eCLIP19.3■□□□□ 0.684e-7■■□□□ 12.5
ACTN4-201ENST00000252699 SKIDA1Q1XH10 827 aa19.3■□□□□ 0.68
ACTN4-201ENST00000252699 PNMA1Q8ND90 353 aa19.3■□□□□ 0.68
ACTN4-201ENST00000252699 TMC4Q7Z404 712 aa19.3■□□□□ 0.68
ACTN4-201ENST00000252699 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.3■□□□□ 0.685e-7■■■■■ 99.8
ACTN4-201ENST00000252699 CEP170BQ9Y4F5 1589 aaPredicted RBP19.3■□□□□ 0.68
ACTN4-201ENST00000252699 POLR2DO15514 142 aaKnown RBP19.3■□□□□ 0.68
ACTN4-201ENST00000252699 PLCD1P51178 756 aa19.3■□□□□ 0.68
ACTN4-201ENST00000252699 GLT8D2Q9H1C3 349 aa19.3■□□□□ 0.68
ACTN4-201ENST00000252699 CLSTN2Q9H4D0 955 aa19.3■□□□□ 0.68
ACTN4-201ENST00000252699 TTC12Q9H892 705 aaPredicted RBP19.3■□□□□ 0.68
ACTN4-201ENST00000252699 BSDC1Q9NW68 430 aaPredicted RBP19.3■□□□□ 0.68
ACTN4-201ENST00000252699 OVOS2A0A0G2JMS6 1433 aa19.29■□□□□ 0.68
ACTN4-201ENST00000252699 CCNT1O60563 726 aaKnown RBP19.29■□□□□ 0.68
ACTN4-201ENST00000252699 DYNLL1P63167 89 aaKnown RBP19.29■□□□□ 0.68
ACTN4-201ENST00000252699 BICD1Q96G01 975 aa19.29■□□□□ 0.68
ACTN4-201ENST00000252699 TMX1Q9H3N1 280 aa19.29■□□□□ 0.68
ACTN4-201ENST00000252699 MED23Q9ULK4 1368 aa19.29■□□□□ 0.68
ACTN4-201ENST00000252699 SNAP23O00161 211 aa19.29■□□□□ 0.68
ACTN4-201ENST00000252699 KRT25Q7Z3Z0 450 aa19.29■□□□□ 0.68
ACTN4-201ENST00000252699 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.29■□□□□ 0.683e-7■■■□□ 15.1
ACTN4-201ENST00000252699 AKR1B10O60218 316 aa19.29■□□□□ 0.68
ACTN4-201ENST00000252699 DNA2P51530 1060 aa19.29■□□□□ 0.68
ACTN4-201ENST00000252699 MMRN2Q9H8L6 949 aa19.29■□□□□ 0.68
ACTN4-201ENST00000252699 TXKP42681 527 aa19.29■□□□□ 0.68
ACTN4-201ENST00000252699 ADCY7P51828 1080 aa19.29■□□□□ 0.68
ACTN4-201ENST00000252699 ZMYM6O95789 1325 aa19.28■□□□□ 0.68
ACTN4-201ENST00000252699 PRKAB2O43741 272 aa19.28■□□□□ 0.68
ACTN4-201ENST00000252699 SPAG5Q96R06 1193 aa19.28■□□□□ 0.68
ACTN4-201ENST00000252699 RBSNQ9H1K0 784 aa19.28■□□□□ 0.68
ACTN4-201ENST00000252699 SNW1Q13573 536 aaKnown RBP19.28■□□□□ 0.68
ACTN4-201ENST00000252699 PIH1D3Q9NQM4 214 aaKnown RBP19.28■□□□□ 0.68
ACTN4-201ENST00000252699 IFNKQ9P0W0 207 aa19.28■□□□□ 0.68
ACTN4-201ENST00000252699 COL15A1P39059 1388 aa19.28■□□□□ 0.68
ACTN4-201ENST00000252699 ZNF202O95125 648 aa19.28■□□□□ 0.68
ACTN4-201ENST00000252699 MYL5Q02045 173 aa19.28■□□□□ 0.68
ACTN4-201ENST00000252699 SCRN1Q12765 414 aa19.28■□□□□ 0.68
ACTN4-201ENST00000252699 GRAPQ13588 217 aa19.28■□□□□ 0.68
ACTN4-201ENST00000252699 GRAPLQ8TC17 118 aaPredicted RBP19.28■□□□□ 0.68
ACTN4-201ENST00000252699 AXDND1Q5T1B0 1012 aaPredicted RBP19.27■□□□□ 0.68
ACTN4-201ENST00000252699 GOLGA6L9A6NEM1 432 aa19.27■□□□□ 0.68
ACTN4-201ENST00000252699 B4DLN1 442 aa19.27■□□□□ 0.68
ACTN4-201ENST00000252699 CCDC174Q6PII3 467 aa19.27■□□□□ 0.68
ACTN4-201ENST00000252699 TMEM131LA2VDJ0 1609 aa19.27■□□□□ 0.68
ACTN4-201ENST00000252699 TRIM28Q13263 835 aaKnown RBP19.27■□□□□ 0.68
ACTN4-201ENST00000252699 LCORLQ8N3X6 602 aa19.27■□□□□ 0.68
ACTN4-201ENST00000252699 GJD4Q96KN9 370 aaPredicted RBP19.27■□□□□ 0.68
ACTN4-201ENST00000252699 FAM13AO94988 1023 aa19.27■□□□□ 0.67
ACTN4-201ENST00000252699 PCP11498 1178 aaKnown RBP19.27■□□□□ 0.67
ACTN4-201ENST00000252699 MCAMP43121 646 aa19.27■□□□□ 0.67
ACTN4-201ENST00000252699 SV2BQ7L1I2 683 aa19.27■□□□□ 0.67
ACTN4-201ENST00000252699 GTPBP4Q9BZE4 634 aaKnown RBP19.27■□□□□ 0.67
ACTN4-201ENST00000252699 ZBTB21Q9ULJ3 1066 aa19.27■□□□□ 0.67
ACTN4-201ENST00000252699 USP28Q96RU2 1077 aa19.26■□□□□ 0.67
ACTN4-201ENST00000252699 CDHR2Q9BYE9 1310 aa19.26■□□□□ 0.67
ACTN4-201ENST00000252699 MMP10P09238 476 aa19.26■□□□□ 0.67
ACTN4-201ENST00000252699 REXO1Q8N1G1 1221 aaKnown RBP19.26■□□□□ 0.67
ACTN4-201ENST00000252699 PKD2L1Q9P0L9 805 aa19.26■□□□□ 0.67
ACTN4-201ENST00000252699 BICDL2A1A5D9 508 aa19.26■□□□□ 0.67
ACTN4-201ENST00000252699 CPXCR1Q8N123 301 aa19.26■□□□□ 0.67
ACTN4-201ENST00000252699 JCADQ9P266 1359 aa19.26■□□□□ 0.67
ACTN4-201ENST00000252699 DEPDC5O75140 1603 aa19.26■□□□□ 0.67
ACTN4-201ENST00000252699 SP4Q02446 784 aa19.26■□□□□ 0.67
ACTN4-201ENST00000252699 GNG11P61952 73 aa19.25■□□□□ 0.67
ACTN4-201ENST00000252699 NECTIN1Q15223 517 aa19.25■□□□□ 0.67
ACTN4-201ENST00000252699 CCT6AP40227 531 aaKnown RBP19.25■□□□□ 0.67
ACTN4-201ENST00000252699 PRKG1Q13976 671 aa19.25■□□□□ 0.67
ACTN4-201ENST00000252699 APOA5Q6Q788 366 aa19.25■□□□□ 0.67
ACTN4-201ENST00000252699 DESP17661 470 aa19.25■□□□□ 0.67
ACTN4-201ENST00000252699 USH1GQ495M9 461 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms