RNA–Protein interactions for RNA: ENST00000245323.4

EFNB2-201, Transcript of ephrin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB2, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2-201ENST00000245323 DTHD1Q6ZMT9 781 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 PNMA1Q8ND90 353 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 KIF18AQ8NI77 898 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 LMBRD1Q9NUN5 540 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 COL15A1P39059 1388 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 GDF11O95390 407 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 MYCLP12524 364 aaPredicted RBP12.94□□□□□ -0.34
EFNB2-201ENST00000245323 SKILP12757 684 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 GNA11P29992 359 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 PAF1Q8N7H5 531 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 VTI1AQ96AJ9 217 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 GJB4Q9NTQ9 266 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 SCAF8Q9UPN6 1271 aaKnown RBP12.94□□□□□ -0.34
EFNB2-201ENST00000245323 GINS2Q9Y248 185 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 JCADQ9P266 1359 aa12.94□□□□□ -0.34
EFNB2-201ENST00000245323 OVOS2A0A0J9YW53 1432 aa12.93□□□□□ -0.34
EFNB2-201ENST00000245323 OVOS2Q6IE36 1432 aa12.93□□□□□ -0.34
EFNB2-201ENST00000245323 BACH1O14867 736 aa12.93□□□□□ -0.34
EFNB2-201ENST00000245323 DEXIO95424 95 aa12.93□□□□□ -0.34
EFNB2-201ENST00000245323 ARID4AP29374 1257 aaPredicted RBP12.93□□□□□ -0.34
EFNB2-201ENST00000245323 PRDM10Q9NQV6 1147 aa12.93□□□□□ -0.34
EFNB2-201ENST00000245323 EXOC1Q9NV70 894 aa12.93□□□□□ -0.34
EFNB2-201ENST00000245323 AGLP35573 1532 aa12.93□□□□□ -0.34
EFNB2-201ENST00000245323 SPATA31A1Q5TZJ5 1347 aa12.93□□□□□ -0.34
EFNB2-201ENST00000245323 BTBD18B2RXH4 712 aa12.93□□□□□ -0.34
EFNB2-201ENST00000245323 RIMS1Q86UR5 1692 aaKnown RBP12.93□□□□□ -0.34
EFNB2-201ENST00000245323 CCNT1O60563 726 aaKnown RBP12.92□□□□□ -0.34
EFNB2-201ENST00000245323 TBCAO75347 108 aaKnown RBP12.92□□□□□ -0.34
EFNB2-201ENST00000245323 BBOX1O75936 387 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 CIAO1O76071 339 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 CYP2E1P05181 493 aaPredicted RBP12.92□□□□□ -0.34
EFNB2-201ENST00000245323 CBX1P83916 185 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 KRT79Q5XKE5 535 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 PDCL2Q8N4E4 241 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 TCHPQ9BT92 498 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 EHMT1Q9H9B1 1298 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.92□□□□□ -0.34
EFNB2-201ENST00000245323 LARGE1O95461 756 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 AIFM3Q96NN9 605 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 TSG101Q99816 390 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 BIN2Q9UBW5 565 aaPredicted RBP12.92□□□□□ -0.34
EFNB2-201ENST00000245323 SOS2Q07890 1332 aaPredicted RBP12.92□□□□□ -0.34
EFNB2-201ENST00000245323 POLR2DO15514 142 aaKnown RBP12.92□□□□□ -0.34
EFNB2-201ENST00000245323 CYP2D6P10635 497 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 ARID5AQ03989 594 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 ANO1Q5XXA6 986 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 EEF2KMTQ96G04 330 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 CPVLQ9H3G5 476 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 PPP1R12BO60237 982 aaPredicted RBP12.92□□□□□ -0.34
EFNB2-201ENST00000245323 ADD2P35612 726 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 MECOMQ03112 1051 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 FKBP15Q5T1M5 1219 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 TAF3Q5VWG9 929 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 FANCBQ8NB91 859 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 LINC00116Q8NCU8 138 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 BICD1Q96G01 975 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.92□□□□□ -0.34
EFNB2-201ENST00000245323 OSBPL3Q9H4L5 887 aa12.92□□□□□ -0.34
EFNB2-201ENST00000245323 AMPD3Q01432 767 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 GRAPQ13588 217 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 UBE3CQ15386 1083 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 GRAPLQ8TC17 118 aaPredicted RBP12.91□□□□□ -0.34
EFNB2-201ENST00000245323 GTF3C6Q969F1 213 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 ISCA1Q9BUE6 129 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 ZSWIM6Q9HCJ5 1215 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 IFNKQ9P0W0 207 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 SLC16A2P36021 539 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 MRPL12P52815 198 aaKnown RBP12.91□□□□□ -0.34
EFNB2-201ENST00000245323 NOLC1Q14978 699 aaKnown RBP eCLIP12.91□□□□□ -0.34
EFNB2-201ENST00000245323 CLEC4GQ6UXB4 293 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 KRI1Q8N9T8 703 aaKnown RBP12.91□□□□□ -0.34
EFNB2-201ENST00000245323 SLC44A5Q8NCS7 719 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 RASGRP4Q8TDF6 673 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 FTOQ9C0B1 505 aaKnown RBP eCLIP12.91□□□□□ -0.34
EFNB2-201ENST00000245323 ARHGEF10LQ9HCE6 1279 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 FRMPD1Q5SYB0 1578 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 KLRF2D3W0D1 207 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 GNG11P61952 73 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 LEO1Q8WVC0 666 aaPredicted RBP12.91□□□□□ -0.34
EFNB2-201ENST00000245323 CSRNP1Q96S65 589 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 ZSCAN10Q96SZ4 725 aaPredicted RBP12.91□□□□□ -0.34
EFNB2-201ENST00000245323 PAGR1Q9BTK6 254 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 LEMD3Q9Y2U8 911 aa12.91□□□□□ -0.34
EFNB2-201ENST00000245323 TECPR2O15040 1411 aa12.9□□□□□ -0.34
EFNB2-201ENST00000245323 CERKLQ49MI3 558 aaPredicted RBP12.9□□□□□ -0.34
EFNB2-201ENST00000245323 PPP4R3AQ6IN85 833 aa12.9□□□□□ -0.34
EFNB2-201ENST00000245323 SUPT20HQ8NEM7 779 aa12.9□□□□□ -0.34
EFNB2-201ENST00000245323 SCRN1Q12765 414 aa12.9□□□□□ -0.34
EFNB2-201ENST00000245323 GAS2L3Q86XJ1 694 aa12.9□□□□□ -0.34
EFNB2-201ENST00000245323 A0A087WWV3 80 aa12.9□□□□□ -0.34
EFNB2-201ENST00000245323 USP17L3A6NCW0 530 aa12.9□□□□□ -0.34
EFNB2-201ENST00000245323 USP17L4A6NCW7 530 aa12.9□□□□□ -0.34
EFNB2-201ENST00000245323 PDIA3P30101 505 aaKnown RBP12.9□□□□□ -0.34
EFNB2-201ENST00000245323 USP17L1Q7RTZ2 530 aa12.9□□□□□ -0.34
EFNB2-201ENST00000245323 USP28Q96RU2 1077 aa12.9□□□□□ -0.34
EFNB2-201ENST00000245323 ZSWIM5Q9P217 1185 aa12.9□□□□□ -0.34
EFNB2-201ENST00000245323 BRD1O95696 1058 aa12.9□□□□□ -0.35
EFNB2-201ENST00000245323 FOXO4P98177 505 aa12.9□□□□□ -0.35
EFNB2-201ENST00000245323 VPS72Q15906 364 aa12.9□□□□□ -0.35
EFNB2-201ENST00000245323 FAM212AQ96EL1 285 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms