RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Nfe2l3Q9WTM4 660 aa10.59□□□□□ -0.71
Pdlim5-209ENSMUST00000196908 Mast3Q3U214 1321 aa10.58□□□□□ -0.71
Pdlim5-209ENSMUST00000196908 Plekhg2Q6KAU7 1340 aa10.58□□□□□ -0.71
Pdlim5-209ENSMUST00000196908 Pitpnm2Q6ZPQ6 1335 aa10.58□□□□□ -0.71
Pdlim5-209ENSMUST00000196908 Sbf1Q6ZPE2 1867 aa10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Tpx2A2APB8 745 aaKnown RBP10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 NudcO35685 332 aaKnown RBP10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 GabrdP22933 449 aa10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Map3k13Q1HKZ5 959 aa10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Tbc1d9Q3UYK3 1264 aa10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Acap3Q6NXL5 833 aa10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Trim37Q6PCX9 961 aa10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Slc45a1Q8BIV7 751 aa10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Smc4Q8CG47 1286 aa10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Susd3Q9D176 269 aa10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Stag1Q9D3E6 1258 aa10.58□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 SktA2AQ25 1946 aaKnown RBP10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Pus7B7ZNL8 666 aaKnown RBP10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Trim5E9PV98 497 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Gm44503E9PYU5 387 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Pnmal2G3X9N3 661 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Rhbdl3P58873 404 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Arl14Q3SXC5 192 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Carmil2Q3V3V9 1296 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Kiaa1211Q5PR69 1207 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Dusp4Q8BFV3 398 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Kiaa1024Q8K3V7 917 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Dnaaf4Q8R368 420 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 ParnQ8VDG3 624 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Dbr1Q923B1 550 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Trim26Q99PN3 545 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Cndp2Q9D1A2 475 aaKnown RBP10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 CsadQ9DBE0 493 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Letm1Q9Z2I0 738 aa10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Rbm6S4R1W5 1118 aaKnown RBP10.57□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Slc6a20bO88575 635 aa10.56□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Gpr182P43142 395 aa10.56□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Sox1P53783 391 aa10.56□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Bace1P56818 501 aa10.56□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Cntnap5bQ0V8T8 1292 aa10.56□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Tbc1d10bQ8BHL3 798 aa10.56□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Tmc1Q8R4P5 757 aa10.56□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 SrcapA0A087WQ44 3271 aa10.55□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Vamp4O70480 141 aa10.55□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Wfs1P56695 890 aa10.55□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 VgfQ0VGU4 617 aa10.55□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Fam109bQ14B98 259 aa10.55□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Spg7Q3ULF4 781 aa10.55□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Gm5592Q3V0A6 857 aa10.55□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Zfp90Q61967 636 aa10.55□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Ccdc60Q8C4J0 545 aa10.55□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Unc5aQ8K1S4 898 aa10.55□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Irs4Q9Z0Y7 1216 aa10.55□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 G3bp1P97855 465 aaKnown RBP10.54□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Fam193bQ3U2K0 892 aa10.54□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Skap1Q3UUV5 355 aa10.54□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Ddx4Q61496 702 aa10.54□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Tm4sf1Q64302 202 aa10.54□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Capns2Q9D7J7 247 aa10.54□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 XdhQ00519 1335 aa10.54□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Gm9857F7CXR1 130 aa10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Adam15O88839 864 aa10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Atp9bP98195 1146 aa10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Lins1Q3U1D0 764 aa10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Ccdc27Q3V036 639 aa10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Gnat3Q3V3I2 354 aa10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Ccdc85aQ5SP85 500 aa10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Maco1Q7TQE6 664 aaKnown RBP10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Rab3gap1Q80UJ7 981 aa10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Cdca7lQ922M5 438 aa10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Jag1Q9QXX0 1218 aa10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 Wdr33Q8K4P0 1330 aaKnown RBP10.53□□□□□ -0.72
Pdlim5-209ENSMUST00000196908 EomesO54839 707 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 EnamO55196 1274 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Nkx1-2P42580 305 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 GclcP97494 637 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 HmgcrQ01237 887 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Col6a1Q04857 1025 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ccdc33Q3ULW6 985 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Tigd5Q499M4 642 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Cavin2Q63918 418 aaKnown RBP10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ddx11Q6AXC6 880 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Plekhm2Q80TQ5 1018 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ubap2lQ80X50 1107 aaKnown RBP10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Sv2bQ8BG39 683 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Taco1Q8K0Z7 294 aaKnown RBP10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Trib2Q8K4K3 343 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Pqbp1Q91VJ5 263 aaKnown RBP10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Ncoa5Q91W39 579 aaKnown RBP10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Atl3Q91YH5 541 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Mov10l1Q99MV5 1187 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Chmp3Q9CQ10 224 aa10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 RarsQ9D0I9 660 aaKnown RBP10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Znfx1Q8R151 1909 aaKnown RBP10.52□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Gm7173A0A0G2JEB6 3132 aa10.51□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Cfdp1O88271 295 aaKnown RBP10.51□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Zap70P43404 618 aa10.51□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Q3UPC7 1272 aa10.51□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Fam160a1Q505K2 1081 aa10.51□□□□□ -0.73
Pdlim5-209ENSMUST00000196908 Cfap52Q5F201 620 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms