RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Wee1P47810 646 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Kifap3P70188 793 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Col9a2Q07643 688 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Arglu1Q3UL36 271 aaKnown RBP10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ccdc114Q3UX62 658 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Rcn2Q8BP92 320 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Polr2bQ8CFI7 1174 aaKnown RBP10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 BlmhQ8R016 455 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 FliiQ9JJ28 1271 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ap1m2Q9WVP1 423 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Gm13128L7MU96 475 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Atp6v1aP50516 617 aaKnown RBP10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Rgl3Q3UYI5 709 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Crtc1Q68ED7 630 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Clec4a1Q80UI7 245 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Traf3ip3Q8C0G2 513 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 FbrsQ8R089 466 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Eps8l1Q8R5F8 716 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Spata24Q6P926 205 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Efr3bQ6ZQ18 817 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Cib4Q9D9N5 185 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Bicdl1A0JNT9 577 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Birc2Q62210 612 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Vac14Q80WQ2 782 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Coro2bQ8BH44 480 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Tab2Q99K90 693 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Rufy3Q9D394 469 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Tbk1Q9WUN2 729 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Eps8l3Q91WL0 600 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Mfsd4b4J3QNS5 503 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Gnat2P50149 354 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 MafbP54841 323 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Krt26Q3TRJ4 462 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Usp8Q80U87 1080 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Anapc4Q91W96 807 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Scnn1bQ9WU38 638 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 RxraP28700 467 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Upf3bQ3ULL6 472 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Sv2cQ69ZS6 727 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Gucy1a3Q9ERL9 691 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Zfp788E9Q980 884 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Tuba3aP05214 450 aaKnown RBP9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ddit3P35639 168 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Prr7Q3V0I2 269 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ppp1r9bQ6R891 817 aaKnown RBP9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Acat2Q8CAY6 397 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Stard7Q8R1R3 373 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Arhgef3Q91X46 524 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ak2Q9WTP6 239 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Zkscan2G3X952 960 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Prkg2Q61410 762 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Bbs9Q811G0 885 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Kctd5Q8VC57 234 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Cyp2c50Q91X77 490 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Dnajc7Q9QYI3 494 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Mta2Q9R190 668 aa9.99□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ifrd1P19182 449 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Atp9bP98195 1146 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Nom1Q3UFM5 854 aaKnown RBP9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Trpc1Q61056 793 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Mysm1Q69Z66 819 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Q8C6G1 249 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Iqsec1Q8R0S2 961 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Rufy2Q8R4C2 606 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Mtfr2Q8VED8 361 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Rabep2Q91WG2 554 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 RpainQ9CWY9 219 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Fmnl1Q9JL26 1094 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Dlc1Q9R0Z9 1092 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Rfwd2Q9R1A8 733 aaKnown RBP9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Pdzrn4E9PUZ9 1014 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Yme1l1O88967 715 aaKnown RBP9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Lire1P11260 357 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 LmnaP48678 665 aaKnown RBP9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Pafah1b1P63005 410 aaKnown RBP9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Lmntd2Q0VET5 664 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ddb1Q3U1J4 1140 aaKnown RBP9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Mindy4Q3UQI9 744 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Trpm4Q7TN37 1213 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 BspryQ80YW5 473 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Wdr60Q8C761 999 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Scamp1Q8K021 338 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Haus3Q8QZX2 570 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Thsd4Q3UTY6 1018 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 LrmpQ60664 539 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Trpc6Q61143 930 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 TpppQ7TQD2 218 aaKnown RBP9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ttc22Q8C159 568 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Gtf2a1lQ8R4I4 468 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Elp1Q7TT37 1333 aaKnown RBP9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Wdr63B2RY71 923 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Atp6v0a2P15920 856 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ccdc82Q6PG04 518 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Kdm1aQ6ZQ88 853 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Arhgap18Q8K0Q5 663 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Nek3Q9R0A5 511 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Heatr4E9Q357 955 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Gm5814J3QP80 125 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 CfbP04186 761 aa9.98□□□□□ -0.81
Clcn3-202ENSMUST00000056508 HpdP49429 393 aa9.98□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms