RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Usp42B2RQC2 1324 aaKnown RBP21.92■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Usp17ldG5E8G2 545 aa21.91■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Usp17lcG5E8I7 545 aa21.91■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Gprin1Q3UNH4 932 aa21.91■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Rasa3Q60790 834 aa21.91■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Tshz3Q8CGV9 1081 aa21.91■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Rassf8Q8CJ96 419 aa21.91■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Snapc2Q91XA5 359 aa21.91■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Ltbp2O08999 1813 aa21.91■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Gm38655A0A286YDK6 273 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Armc3A2AU72 881 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Prpmp5E9PXN1 296 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Anapc15P60007 132 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Spata5Q3UMC0 893 aaKnown RBP21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Hand2Q61039 217 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Fam196bQ6GQV1 535 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Acap3Q6NXL5 833 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Tmc1Q8R4P5 757 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Dock5B2RY04 1868 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Ythdc1E9Q5K9 736 aaKnown RBP21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Vmn2r68L7N2B3 851 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Cd3dP04235 173 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Il7P10168 154 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Sh2d1b2Q45HK4 132 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Spty2d1Q68FG3 682 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Exoc8Q6PGF7 716 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Phf20l1Q8CCJ9 1013 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Il31raQ8K5B1 716 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Atf7Q8R0S1 413 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Rnf181Q9CY62 165 aa21.9■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Col11a1Q61245 1804 aa21.89■■□□□ 1.1
Vti1b-201ENSMUST00000055262 Palm3A2TJV2 734 aa21.89■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Casp12O08736 419 aa21.89■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Mmp10O55123 476 aa21.89■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Pde11aP0C1Q2 933 aa21.89■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Evi5P97366 809 aa21.89■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Znf667Q2TL60 609 aa21.89■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Q3TYL0 343 aa21.89■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Htatsf1Q8BGC0 757 aa21.89■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Shisa4Q8CA71 197 aa21.89■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Znf638Q61464 1960 aaKnown RBP21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Ano3A2AHL1 981 aa21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 VrtnQ3SYK4 740 aa21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Senp6Q6P7W0 1132 aa21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Cnksr2Q80YA9 1032 aa21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Rnf41Q8BH75 317 aa21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Cnot6lQ8VEG6 555 aa21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Styxl1Q9DAR2 321 aa21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 CsadQ9DBE0 493 aa21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Tjap1Q9DCD5 539 aa21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Tfip11Q9ERA6 838 aaKnown RBP21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Col2a1P28481 1487 aa21.88■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Znf326O88291 580 aa21.87■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Otud5Q3U2S4 566 aa21.87■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Cep131Q62036 1060 aa21.87■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Trnp1Q80ZI1 223 aa21.87■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Krt84Q99M73 603 aa21.87■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Dynll2Q9D0M5 89 aa21.87■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Fbxl16A2RT62 479 aa21.86■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Cbx2P30658 519 aa21.86■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Ercc3P49135 783 aa21.86■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Spryd7Q3TFQ1 196 aa21.86■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Zfp953Q3UPV7 304 aa21.86■■□□□ 1.09
Vti1b-201ENSMUST00000055262 D630036H23RikQ3UQD6 204 aa21.86■■□□□ 1.09
Vti1b-201ENSMUST00000055262 ErmnQ5EBJ4 281 aa21.86■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Sgsm2Q80U12 1005 aa21.86■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Pcdhb22Q91XZ8 794 aa21.86■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Bap1Q99PU7 728 aa21.86■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Cyp3a59D3Z2W7 503 aa21.85■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Abl1P00520 1123 aa21.85■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Tnni2P13412 182 aa21.85■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Atoh1P48985 351 aa21.85■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Snap47Q8R570 413 aa21.85■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Fbxo33Q8VE08 562 aa21.85■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Kcnb2A6H8H5 907 aa21.84■■□□□ 1.09
Vti1b-201ENSMUST00000055262 PcQ05920 1178 aa21.84■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Cnnm2Q3TWN3 875 aa21.84■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Ppp1r11Q8K1L5 131 aa21.84■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Zbtb43Q9DAI4 467 aa21.84■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Irgm2A0A140LIF8 407 aa21.83■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Zkscan16A2ALW2 728 aa21.83■■□□□ 1.09
Vti1b-201ENSMUST00000055262 CtshP49935 333 aa21.83■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Mrps27Q8BK72 415 aaKnown RBP21.83■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Vmn1r199Q8R280 367 aa21.83■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Ero1bQ8R2E9 467 aa21.83■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Sirt2Q8VDQ8 389 aa21.83■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Gpsm2Q8VDU0 679 aa21.83■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Znf287Q9EQB9 759 aa21.83■■□□□ 1.09
Vti1b-201ENSMUST00000055262 Ccdc174Q3U155 467 aa21.83■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Scnn1aQ61180 699 aa21.83■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Ube2oQ6ZPJ3 1288 aa21.83■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Atad2Q8CDM1 1040 aa21.83■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Cdk8Q8R3L8 464 aa21.83■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Acot3Q9QYR7 432 aa21.83■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Psma5Q9Z2U1 241 aaKnown RBP21.83■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Cfap99A0A140LIX9 648 aa21.82■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Slc1a4O35874 532 aa21.82■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Kif20aP97329 887 aa21.82■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Aak1Q3UHJ0 959 aa21.82■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Garem2Q6PAJ3 880 aa21.82■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms