RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Ifit1Q64282 463 aa19.31■□□□□ 0.68
Usp48-201ENSMUST00000055131 Apol7cQ8C6E1 369 aa19.31■□□□□ 0.68
Usp48-201ENSMUST00000055131 Tnip1Q9WUU8 647 aa19.31■□□□□ 0.68
Usp48-201ENSMUST00000055131 Mtss1lQ6P9S0 715 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Tubb2aQ7TMM9 445 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Tubb2bQ9CWF2 445 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Naa30Q8CES0 364 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Cabp7Q91ZM8 215 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Armc9Q9D2I5 817 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Cyp2j7A0A140T8U1 504 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Nbr1P97432 988 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Rassf4Q8CB96 322 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Parp2O88554 559 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Nucks1Q80XU3 234 aaKnown RBP19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Bzw2Q91VK1 419 aaKnown RBP19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Myl7Q9QVP4 175 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Senp1P59110 640 aa19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Pym1Q8CHP5 203 aaKnown RBP19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 PpanQ91YU8 470 aaKnown RBP19.3■□□□□ 0.68
Usp48-201ENSMUST00000055131 Ap1b1O35643 943 aaKnown RBP19.29■□□□□ 0.68
Usp48-201ENSMUST00000055131 Micall1Q8BGT6 870 aa19.29■□□□□ 0.68
Usp48-201ENSMUST00000055131 Atg3Q9CPX6 314 aa19.29■□□□□ 0.68
Usp48-201ENSMUST00000055131 TnnQ80Z71 1560 aa19.29■□□□□ 0.68
Usp48-201ENSMUST00000055131 Tbc1d9bQ5SVR0 1263 aa19.29■□□□□ 0.68
Usp48-201ENSMUST00000055131 Rab44Q8CB87 725 aa19.29■□□□□ 0.68
Usp48-201ENSMUST00000055131 Trpc3Q9QZC1 836 aa19.29■□□□□ 0.68
Usp48-201ENSMUST00000055131 Sos2Q02384 1333 aa19.29■□□□□ 0.68
Usp48-201ENSMUST00000055131 Atp8a2P98200 1148 aa19.29■□□□□ 0.68
Usp48-201ENSMUST00000055131 Mpp4Q6P7F1 635 aa19.29■□□□□ 0.68
Usp48-201ENSMUST00000055131 Wdr3Q8BHB4 942 aaKnown RBP19.29■□□□□ 0.68
Usp48-201ENSMUST00000055131 Tnpo2Q99LG2 887 aaKnown RBP19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 Sf3a3Q9D554 501 aaKnown RBP19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 Magi3Q9EQJ9 1476 aa19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 Zfp781Q0P5U5 243 aa19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 Galnt15Q9D2N8 638 aa19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 InsrrQ9WTL4 1300 aa19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 Trim68Q8K243 485 aa19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 Nxf1Q99JX7 618 aaKnown RBP19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 1700029H14RikE9PY36 240 aa19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 Stmn2P55821 179 aa19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 Erbb3Q61526 1339 aa19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 Cct6bQ61390 531 aa19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 Psmd6Q99JI4 389 aa19.28■□□□□ 0.68
Usp48-201ENSMUST00000055131 Exoc3l2D3YUP5 789 aa19.27■□□□□ 0.68
Usp48-201ENSMUST00000055131 Gm10110D3Z5M2 615 aa19.27■□□□□ 0.68
Usp48-201ENSMUST00000055131 Znf667Q2TL60 609 aa19.27■□□□□ 0.68
Usp48-201ENSMUST00000055131 Eno4Q8C042 619 aa19.27■□□□□ 0.68
Usp48-201ENSMUST00000055131 PdiltQ9DAN1 588 aa19.27■□□□□ 0.68
Usp48-201ENSMUST00000055131 Speer3W4VSP1 261 aa19.27■□□□□ 0.68
Usp48-201ENSMUST00000055131 Fam228aQ8CDW1 299 aa19.27■□□□□ 0.68
Usp48-201ENSMUST00000055131 Cplx3Q8R1B5 158 aa19.27■□□□□ 0.68
Usp48-201ENSMUST00000055131 Znf830Q8R1N0 363 aaKnown RBP19.27■□□□□ 0.68
Usp48-201ENSMUST00000055131 Taf12Q8VE65 161 aa19.27■□□□□ 0.68
Usp48-201ENSMUST00000055131 Cpb1B2RS76 415 aa19.27■□□□□ 0.67
Usp48-201ENSMUST00000055131 Slc7a6osQ7TPE5 306 aa19.27■□□□□ 0.67
Usp48-201ENSMUST00000055131 Gpcpd1Q8C0L9 675 aa19.27■□□□□ 0.67
Usp48-201ENSMUST00000055131 Nup160Q9Z0W3 1402 aaKnown RBP19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 DgkiD3YWQ0 1071 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Mcm5P49718 733 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Eif4a1P60843 406 aaKnown RBP19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 RilpQ5ND29 369 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 LpxnQ99N69 386 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Cst12Q9DAN8 128 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 ZfxP17012 799 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Hirip3Q8BLH7 601 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Adgrl3Q80TS3 1537 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 1700006A11RikB9EHI3 544 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Cdr2P97817 455 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Ccdc114Q3UX62 658 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 RragaQ80X95 313 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Psrc1Q9D0P7 329 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Stox1B2RQL2 990 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Prl3d1P18121 224 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Pfkfb1P70266 471 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Nsun2Q1HFZ0 757 aaKnown RBP19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 SkiQ60698 725 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Zscan22Q8BGS5 496 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Ccdc28aQ8CEI3 192 aa19.26■□□□□ 0.67
Usp48-201ENSMUST00000055131 Sclt1G5E861 688 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Bank1Q80VH0 783 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Thap12Q9CUX1 758 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Cd2bp2Q9CWK3 342 aaKnown RBP19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Aimp1P31230 310 aaKnown RBP19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Naa25Q8BWZ3 972 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Atad3Q925I1 591 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Psmc2P46471 433 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Ctnna3Q65CL1 895 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Tor4aQ8BH02 426 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Kdm3bQ6ZPY7 1562 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 MmeQ61391 750 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Anks6Q6GQX6 883 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Ankrd24Q80VM7 985 aa19.25■□□□□ 0.67
Usp48-201ENSMUST00000055131 Nlrx1Q3TL44 975 aa19.24■□□□□ 0.67
Usp48-201ENSMUST00000055131 Usp33Q8R5K2 909 aa19.24■□□□□ 0.67
Usp48-201ENSMUST00000055131 Atp2b4Q6Q477 1205 aa19.24■□□□□ 0.67
Usp48-201ENSMUST00000055131 Tubgcp2Q921G8 905 aa19.24■□□□□ 0.67
Usp48-201ENSMUST00000055131 4921530L21RikQ9CQ47 274 aa19.24■□□□□ 0.67
Usp48-201ENSMUST00000055131 Zkscan5Q9Z1D8 819 aa19.24■□□□□ 0.67
Usp48-201ENSMUST00000055131 Rfc1P35601 1131 aa19.24■□□□□ 0.67
Usp48-201ENSMUST00000055131 Cfap74Q3UY96 1578 aa19.24■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms