RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Leo1Q5XJE5 667 aa10.15□□□□□ -0.79
Trim39-201ENSMUST00000042717 Smarcc2Q6PDG5 1213 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Tacc1Q6Y685 774 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Nap1l3Q794H2 544 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Naa30Q8CES0 364 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Rtn1Q8K0T0 780 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Gripap1Q8VD04 806 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Sirt2Q8VDQ8 389 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Yipf1Q91VU1 306 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Rbm6S4R1W5 1118 aaKnown RBP10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Usp5P56399 858 aaKnown RBP10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Mdh1bQ5F204 500 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Scaf8Q6DID3 1268 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Camkk2Q8C078 588 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 SdsQ8VBT2 327 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Ubac1Q8VDI7 409 aa10.14□□□□□ -0.79
Trim39-201ENSMUST00000042717 Aox4Q3TYQ9 1336 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Naaladl2A0A0N4SUJ3 795 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Sec23aQ01405 765 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Klhdc9Q3USL1 350 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Acnat2Q8BGG9 420 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Ranbp6Q8BIV3 1105 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Trmt2aQ8BNV1 574 aaKnown RBP10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Paf1Q8K2T8 535 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Gpr108Q91WD0 569 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 A0A1Y7VML8 143 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Adam7O35227 789 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Gas1Q01721 343 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Dpp8Q80YA7 892 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Triml1Q8BVP1 470 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 CrebrfQ8CDG5 640 aaKnown RBP10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Znf638Q61464 1960 aaKnown RBP10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Col5a2Q3U962 1497 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 FAM186AQ9D9R9 1790 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Cfap99A0A140LIX9 648 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Vmn2r68L7N2B3 851 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 En2P09066 324 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Dnm1P39053 867 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 LyarQ08288 388 aaKnown RBP10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Ncbp1Q3UYV9 790 aaKnown RBP10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Gm2163Q6PCY5 473 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Gpr150Q8BL07 427 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Cep89Q9CZX2 791 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Kcnq2Q9Z351 759 aa10.13□□□□□ -0.79
Trim39-201ENSMUST00000042717 Scn9aQ62205 1984 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Flvcr1B2RXV4 560 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Cdkl5Q3UTQ8 938 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Zbtb39Q6PDK0 712 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Ccar2Q8VDP4 922 aaKnown RBP10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Zmym2Q9CU65 1376 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Fam186bD3Z420 943 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 PcQ05920 1178 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 GnptabQ69ZN6 1235 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Gjd4Q8BSD4 364 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Mboat7Q8CHK3 473 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Kcnj14Q8JZN3 434 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Hdac9Q99N13 588 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Ly6iQ9WU67 134 aa10.12□□□□□ -0.79
Trim39-201ENSMUST00000042717 Clrn2B2RVW2 232 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 A430078G23RikE9Q7Y4 484 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Cyp2c68K7N6C2 491 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Alppl2P24823 529 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Pcmtd1P59913 357 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Cplx1P63040 134 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Traf3ip1Q149C2 625 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 R3hcc1Q8BSI6 488 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Zfp317Q8C0Q5 607 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Trim59Q922Y2 403 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Glt1d1A4FUP9 346 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Mtx1P47802 317 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 MycbpapQ5SUV2 932 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Larp6Q8BN59 492 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Shtn1Q8K2Q9 631 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Rnaseh2aQ9CWY8 301 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Zbed3Q9D0L1 228 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Cdc45Q9Z1X9 566 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Zfp646Q6NV66 1788 aa10.11□□□□□ -0.79
Trim39-201ENSMUST00000042717 Zscan20B2KFW1 1030 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Arid4aF8VPQ2 1261 aaKnown RBP10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Lnx1O70263 728 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Cd22P35329 862 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Mcm4P49717 862 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Ncf1Q09014 390 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Map9Q3TRR0 646 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Slc10a5Q5PT54 434 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Tom1l2Q5SRX1 507 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Fxr1Q61584 677 aaKnown RBP10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Tbc1d5Q80XQ2 815 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Ppp1r11Q8K1L5 131 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Gimap7Q8R379 293 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Rgs12Q8CGE9 1381 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Stag2O35638 1231 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Tfcp2Q9ERA0 502 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Tmem47Q9JJG6 181 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Myh6Q02566 1938 aaKnown RBP10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Foxp1P58462 705 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Esyt1Q3U7R1 1092 aaKnown RBP10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Wdr93Q402B2 695 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 CbarpQ66L44 698 aa10.1□□□□□ -0.79
Trim39-201ENSMUST00000042717 Tmem79Q9D709 391 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms