RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 GmnnO88513 206 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tdo2P48776 406 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Bank1Q80VH0 783 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tor1aip1Q921T2 595 aaKnown RBP9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Appbp2Q9DAX9 585 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Uchl5Q9WUP7 329 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Znf667Q2TL60 609 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Trip13Q3UA06 432 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Map7d1A2AJI0 846 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Cfap157Q0VFX2 523 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ccdc129Q14B48 1034 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Pank2Q3U4S0 443 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ccdc38Q8CDN8 563 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Fam186bD3Z420 943 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tor4aQ8BH02 426 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Rassf4Q8CB96 322 aa9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Acsl3Q9CZW4 720 aaKnown RBP9.82□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Krt9Q6RHW0 743 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tcp11l1Q8BTG3 509 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Gramd4Q8CB44 633 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ccdc89Q9DA73 370 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Vps36Q91XD6 386 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Asic2Q925H0 512 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 C87499Q3UX49 493 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Spire2Q8K1S6 718 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Gtpbp4Q99ME9 634 aaKnown RBP9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Art2bO35975 289 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Slc27a3O88561 667 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ddx49Q4FZF3 480 aaKnown RBP9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Kctd1Q5M956 257 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 KhnynQ80U38 671 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Gucy1a3Q9ERL9 691 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tacc3Q9JJ11 631 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 E9QMW4 1145 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Bend3Q6PAL0 825 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 BrapQ99MP8 591 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Krtap5-3Q9D226 196 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Cyp27a1Q9DBG1 533 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Sh2d4bA6X942 431 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Lipo1J3QME6 396 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ppp2r5cQ60996 524 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tsga10Q6NY15 697 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Aldh8a1Q8BH00 487 aa9.81□□□□□ -0.84
Ttc28-201ENSMUST00000040111 GabpaQ00422 454 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Usp50Q6P8X6 390 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Pramel6Q810Y9 485 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Me3Q8BMF3 604 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Rbm43Q99J64 343 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ano3A2AHL1 981 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Proca1B0QZF7 307 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Gm10093D3YYI8 482 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Hdac1O09106 482 aaKnown RBP9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Atp1a2Q6PIE5 1020 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Adarb2Q9JI20 745 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Oas2E9Q9A9 742 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Meis1Q60954 390 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Talpid3E9PV87 1520 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tldc2A2ACG1 198 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Eftud2O08810 971 aaKnown RBP9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Cyp26a1O55127 497 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Caprin2Q05A80 1031 aaKnown RBP9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Susd4Q8BH32 490 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Azi2Q9QYP6 405 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Kdm6bQ5NCY0 1641 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Sh3bp1P55194 680 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Top1Q04750 767 aaKnown RBP9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Zbtb38Q3LR78 1197 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Saal1Q9D2C2 474 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 AdnpQ9Z103 1108 aaKnown RBP9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Supt6hQ62383 1726 aaKnown RBP9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 FanccP50652 591 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Smarcad1Q04692 1021 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Trim28Q62318 834 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ccdc148Q6P5U8 527 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Gpr101Q80T62 511 aa9.8□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Robo2Q7TPD3 1470 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Iqsec3Q3TES0 1195 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tmco5aQ9D9D5 303 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Elf2Q9JHC9 593 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Kcnh3Q9WVJ0 1095 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 DbnlQ62418 436 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Gins2Q9D600 185 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Efcab6Q6P1E8 1516 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Cspg5Q71M36 566 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Desi2Q9D291 194 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Dnajb7Q9QYI8 312 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Kiaa1107Q80TK0 1369 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ube3aO08759 870 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Depdc1bQ8BH88 529 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 RpgrQ9R0X5 1001 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 GnaqP21279 359 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tpcn2Q8BWC0 731 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Clic4Q9QYB1 253 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Nup160Q9Z0W3 1402 aaKnown RBP9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Pard3Q99NH2 1333 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Opa1P58281 960 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Mettl14Q3UIK4 456 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Specc1Q5SXY1 1067 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Calcoco1Q8CGU1 691 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 P4ha1Q60715 534 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms