RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 C3P01027 1663 aa17.09■□□□□ 0.33
Scaf4-201ENSMUST00000039280 Arid5bQ8BM75 1188 aaKnown RBP17.09■□□□□ 0.33
Scaf4-201ENSMUST00000039280 Ccz1Q8C1Y8 480 aa17.09■□□□□ 0.33
Scaf4-201ENSMUST00000039280 Ccdc122Q8BVN0 290 aa17.08■□□□□ 0.33
Scaf4-201ENSMUST00000039280 Hps4Q99KG7 671 aa17.08■□□□□ 0.33
Scaf4-201ENSMUST00000039280 Zcrb1Q9CZ96 217 aaKnown RBP17.08■□□□□ 0.33
Scaf4-201ENSMUST00000039280 Gja10Q9WUS4 505 aa17.08■□□□□ 0.33
Scaf4-201ENSMUST00000039280 Kif20bQ80WE4 1774 aaKnown RBP17.08■□□□□ 0.33
Scaf4-201ENSMUST00000039280 Med23Q80YQ2 1367 aa17.08■□□□□ 0.33
Scaf4-201ENSMUST00000039280 Ttll12Q3UDE2 639 aa17.08■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Arid3aQ62431 601 aa17.08■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Rnf187Q8BFX1 236 aa17.08■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Slc13a4Q8BZ82 625 aa17.08■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Eif6O55135 245 aa17.08■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Eme2Q56A04 373 aa17.08■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Ift88Q61371 824 aa17.08■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Xrcc4Q924T3 326 aa17.08■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Tab2Q99K90 693 aa17.08■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Cyp2ab1S4R196 498 aa17.08■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Vmn2r23E9PXI5 849 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 PparaP23204 468 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Pde6aP27664 859 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 SsbP32067 415 aaKnown RBP17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Il15P48346 162 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Foxp1P58462 705 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Pald1P70261 859 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Irx2P81066 474 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Ces1dQ8VCT4 565 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Odf2A3KGV1 830 aaKnown RBP17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Rbm15bQ6PHZ5 887 aaKnown RBP17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Atp6v1aP50516 617 aaKnown RBP17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 TfrcQ62351 763 aaKnown RBP17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Kif1bpQ6ZPU9 617 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Pcdhb15Q91Y04 786 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Dok7Q18PE0 504 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Trip6Q9Z1Y4 480 aa17.07■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Cd3dP04235 173 aa17.06■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Hs2st1Q8R3H7 356 aa17.06■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Dnajc14Q921R4 703 aa17.06■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Ttc5Q99LG4 440 aa17.06■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Dnajc25A2ALW5 357 aa17.06■□□□□ 0.32
Scaf4-201ENSMUST00000039280 VrtnQ3SYK4 740 aa17.06■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Tshz1Q5DTH5 1084 aa17.06■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Paf1Q8K2T8 535 aa17.06■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Olfr118Q7TRJ6 321 aa17.06■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Gps2Q921N8 327 aa17.06■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Uchl5Q9WUP7 329 aa17.06■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Celf1P28659 486 aaKnown RBP17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Ncf1Q09014 390 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 CtifQ6PEE2 600 aaKnown RBP17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Slc44a1Q6X893 653 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Foxo4Q9WVH3 505 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 MthfslL7N466 203 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 AcrbpQ3V140 540 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Secisbp2lQ6A098 1086 aaKnown RBP17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Zmynd15Q8C0R7 736 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Klhl34A2AI76 644 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 1700013D24RikQ0P521 120 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Gimap7Q8R379 293 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Tut1Q8R3F9 869 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Cxcl11Q9JHH5 100 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Ift172Q6VH22 1749 aa17.05■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Slc27a1Q60714 646 aa17.04■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Clic6Q8BHB9 596 aa17.04■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Map10Q8BJS7 891 aa17.04■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Cdca7Q9D0M2 382 aa17.04■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Etf1Q8BWY3 437 aaKnown RBP17.04■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Hps3Q91VB4 1002 aa17.04■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Kcnq5Q9JK45 933 aa17.04■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Znf428Q8C1M2 176 aa17.04■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Zswim4Q8C7B8 1101 aa17.04■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Smc1aQ9CU62 1233 aaKnown RBP17.04■□□□□ 0.32
Scaf4-201ENSMUST00000039280 AatfQ9JKX4 526 aaKnown RBP17.04■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Inpp5bQ8K337 993 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 2310002L09RikQ9D7L5 217 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Knop1Q9Z2Q2 478 aaKnown RBP17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Ssrp1Q08943 708 aaKnown RBP17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Znf667Q2TL60 609 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 CtcfQ61164 736 aaKnown RBP17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Sycp1Q62209 993 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Cyp4f39Q8BGU0 532 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Fbxo3Q9DC63 480 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 AmfrQ9R049 643 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Bcl9Q9D219 1425 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Col14a1Q80X19 1797 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Map3k12Q60700 888 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Znf532Q6NXK2 1036 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Fam102bQ8BQS4 339 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Sec62Q8BU14 398 aaKnown RBP17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Hexim1Q8R409 356 aaKnown RBP17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Cd274Q9EP73 290 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Pkd2l2Q9JLG4 621 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Palm3A2TJV2 734 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Tbc1d2B1AVH7 922 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Asic1Q6NXK8 526 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Ppp2r5bQ6PD28 497 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Nap1l5Q9JJF0 156 aa17.03■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Nup153E9Q3G8 1462 aaKnown RBP17.02■□□□□ 0.32
Scaf4-201ENSMUST00000039280 Gm43638A0A0J9YU36 694 aa17.02■□□□□ 0.32
Scaf4-201ENSMUST00000039280 A0A1Y7VML8 143 aa17.02■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 66.6 ms