RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Slc44a1Q6X893 653 aa13.92□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 NelfbQ8C4Y3 580 aa13.92□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Kcnf1Q7TSH7 493 aa13.92□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Sdad1Q80UZ2 687 aaKnown RBP13.92□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Ssfa2Q922B9 1252 aa13.92□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Pde8bE9Q4S1 865 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Myo1aO88329 1043 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Ccdc148Q6P5U8 527 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 AbraQ8BUZ1 375 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 SltmQ8CH25 1031 aaKnown RBP13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Desi2Q9D291 194 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Arid5bQ8BM75 1188 aaKnown RBP13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Nod2Q8K3Z0 1020 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Abcb6Q9DC29 842 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 1700029H14RikE9PY36 240 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 ByslO54825 436 aaKnown RBP13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Irf5P56477 497 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Mei4Q8BRM6 389 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 AdgbG3UZ78 1657 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Gm4340L7N2C4 268 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Cacna2d4Q5RJF7 1116 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Golga5Q9QYE6 729 aa13.91□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Pde11aP0C1Q2 933 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Ift74Q8BKE9 600 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Pnma3Q8JZW8 466 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Ubxn1Q922Y1 297 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 CpvlQ9D3S9 478 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Q9D5Q8 446 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Ctdnep1Q3TP92 244 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Krt39Q6IFX4 482 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 LpxnQ99N69 386 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Pold4Q9CWP8 107 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 FliiQ9JJ28 1271 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Cyp2j7A0A140T8U1 504 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Pde6aP27664 859 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Ctdspl2Q8BG15 465 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Hgh1Q8C3I8 393 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Cul5Q9D5V5 780 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Cps1Q8C196 1500 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Carmil3Q3UFQ8 1375 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Rgs12Q8CGE9 1381 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Exoc3l2D3YUP5 789 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Mapkapk5O54992 473 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 CalrP14211 416 aaKnown RBP13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Slc27a1Q60714 646 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Mcm7Q61881 719 aaKnown RBP13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Themis2Q91YX0 663 aa13.9□□□□□ -0.18
Pdlim5-201ENSMUST00000029941 Foxo3Q9WVH4 672 aa13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 AdnpQ9Z103 1108 aaKnown RBP13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Zfp597E9Q6S0 419 aa13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Phf23Q8BSN5 401 aa13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Mylk2Q8VCR8 613 aa13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Smc1aQ9CU62 1233 aaKnown RBP13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Rad23aP54726 363 aa13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Gpbp1Q6NXH3 473 aaKnown RBP13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Dhx40Q6PE54 779 aaKnown RBP13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Apol10aQ8CCA5 318 aa13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Ccdc105Q9D4K7 499 aa13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Cd274Q9EP73 290 aa13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Miga2Q8BK03 593 aa13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Pcdha7Q91Y13 937 aa13.89□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Nid2O88322 1403 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Serpinc1P32261 465 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Plcb3P51432 1234 aaKnown RBP13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Fam177a1Q8BR63 207 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Cbx6Q9DBY5 414 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Nfil3O08750 462 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Gjc1P28229 396 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Wdhd1P59328 1117 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Emilin1Q99K41 1017 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Cdcp1Q5U462 833 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Rbm26Q6NZN0 1012 aaKnown RBP13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Tas2r124Q7M718 309 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Csrnp2Q8BGQ2 534 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Ankk1Q8BZ25 745 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Cd209bQ8CJ91 325 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Trim59Q922Y2 403 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Hdac6Q9Z2V5 1149 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 MmeQ61391 750 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Fchsd1Q6PFY1 688 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Dcaf5Q80T85 946 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Matr3Q8K310 846 aaKnown RBP13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Rapgef3Q8VCC8 918 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Adcy3Q8VHH7 1145 aa13.88□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Ovgp1Q62010 721 aa13.87□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Rims2Q9EQZ7 1530 aa13.87□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Cd3dP04235 173 aa13.87□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Cap2Q9CYT6 476 aa13.87□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Zfp91Q62511 572 aa13.87□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Clic6Q8BHB9 596 aa13.87□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Hirip3Q8BLH7 601 aa13.87□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Sec62Q8BU14 398 aaKnown RBP13.87□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Als2cr12Q8BVM7 383 aa13.87□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Dnajc21E9Q8D0 531 aa13.87□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Znf18Q810A1 556 aa13.87□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Tnnc1P19123 161 aa13.86□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Lrrc43Q3V0L5 667 aa13.86□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Ccdc157Q5SPX1 718 aa13.86□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Olfr118Q7TRJ6 321 aa13.86□□□□□ -0.19
Pdlim5-201ENSMUST00000029941 Ppm1mQ8BU27 406 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms