RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Stxbp4Q9WV89 557 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Cyp26c1B2RXA7 518 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Foxp1P58462 705 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Adcy5P84309 1262 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 ErmnQ5EBJ4 281 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ddx31Q6NZQ2 687 aaKnown RBP8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Paf1Q8K2T8 535 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 1700003F12RikA2AKE5 210 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Dapk3O54784 448 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Sap30bpQ02614 308 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Fhdc1Q3ULZ2 1149 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Rc3h1Q4VGL6 1130 aaKnown RBP8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Dpp8Q80YA7 892 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Gm28047Q3US59 414 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Pex1Q5BL07 1284 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 WaslQ91YD9 501 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ktn1Q61595 1327 aaKnown RBP8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ank1Q02357 1862 aa8.99□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 A0A0U1RNP2 1173 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Gm36210A0A1B0GS00 229 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ccdc173A0JLY1 547 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Rpusd2Q149F1 553 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 C87499Q3UX49 493 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 MlphQ91V27 590 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Wdr64Q9D565 1086 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Epb41l3Q9WV92 929 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Tcof1O08784 1320 aaKnown RBP8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Myo3bQ1EG27 1305 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Tjp1P39447 1745 aaKnown RBP8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Cspp1B2RX88 1205 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Zkscan7E9PVW1 718 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Gm973E9Q295 1059 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 MthfslL7N466 203 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Calm1P0DP26 149 aaKnown RBP8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Calm2P0DP27 149 aaKnown RBP8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Calm3P0DP28 149 aaKnown RBP8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Zbtb39Q6PDK0 712 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Glis3Q6XP49 780 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 IarsQ8BU30 1262 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Col23a1Q8K4G2 532 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Pdlim2Q8R1G6 349 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Pcdhb15Q91Y04 786 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Spata31d1bE9QA57 1361 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Akr1c19G3X9Y6 323 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ampd3O08739 766 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Alppl2P24823 529 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 MarcksP26645 309 aaKnown RBP8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Rad23bP54728 416 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Zfp51Q3U4L8 781 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Dnaaf2Q8BPI1 814 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Cdk8Q8R3L8 464 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Arpp21Q9DCB4 807 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Mmel1Q9JLI3 765 aa8.98□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Kansl3A2RSY1 903 aaKnown RBP8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Fam184aE9PW83 1143 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Stag2O35638 1231 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Pdzph1Q8BGR1 1238 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Clic6Q8BHB9 596 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Vps53Q8CCB4 832 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ccdc150Q8CDI7 1110 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Luzp1Q8R4U7 1068 aaKnown RBP8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ciapin1Q8WTY4 309 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Trim59Q922Y2 403 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Trmt112Q9DCG9 125 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Znf287Q9EQB9 759 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Gpaa1Q9WTK3 621 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Vmn2r68L7N2B3 851 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Armc2Q3URY6 854 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Paxip1Q6NZQ4 1056 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ndufb9Q9CQJ8 179 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Etnk1Q9D4V0 363 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Api5O35841 504 aaKnown RBP8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Gabpb2P81069 414 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Kif1bpQ6ZPU9 617 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Gpcpd1Q8C0L9 675 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Zfp202Q8C879 641 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Spire2Q8K1S6 718 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Eid1Q9DCR4 169 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Cnpy2Q9QXT0 182 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 GdaQ9R111 454 aa8.97□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Cacna1sQ02789 1880 aa8.96□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Adgra3Q7TT36 1310 aa8.96□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ifi207E9Q3L4 978 aa8.96□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Aknad1E9Q8N6 675 aa8.96□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Fdx1P46656 188 aa8.96□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Sun3Q5SS91 320 aa8.96□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 SrrtQ99MR6 875 aaKnown RBP8.96□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Krt23Q99PS0 422 aa8.96□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Kcnn1Q9EQR3 537 aa8.96□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 A430078G23RikE9Q7Y4 484 aa8.96□□□□□ -0.98
Ccdc39-201ENSMUST00000029222 Csf1rP09581 977 aa8.96□□□□□ -0.98
Ccdc39-201ENSMUST00000029222 PcQ05920 1178 aa8.96□□□□□ -0.98
Ccdc39-201ENSMUST00000029222 Lins1Q3U1D0 764 aa8.96□□□□□ -0.98
Ccdc39-201ENSMUST00000029222 CtcfQ61164 736 aaKnown RBP8.96□□□□□ -0.98
Ccdc39-201ENSMUST00000029222 Ptrh1Q8BW00 204 aa8.96□□□□□ -0.98
Ccdc39-201ENSMUST00000029222 Skor1Q8BX46 964 aa8.96□□□□□ -0.98
Ccdc39-201ENSMUST00000029222 Gpr108Q91WD0 569 aa8.96□□□□□ -0.98
Ccdc39-201ENSMUST00000029222 Polr2dQ9D7M8 142 aaKnown RBP8.96□□□□□ -0.98
Ccdc39-201ENSMUST00000029222 Ptf1aQ9QX98 324 aa8.96□□□□□ -0.98
Ccdc39-201ENSMUST00000029222 Nfe2l3Q9WTM4 660 aa8.96□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms