RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Myo1cQ9WTI7 1063 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Usp42B2RQC2 1324 aaKnown RBP12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Aox1O54754 1333 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Klhl34A2AI76 644 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Stim1P70302 685 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Wdr70Q3TWF6 657 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Sept9Q80UG5 583 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ces1dQ8VCT4 565 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ehd4Q9EQP2 541 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 MarcksP26645 309 aaKnown RBP12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Sept1P42209 366 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ccdc73Q8CDM4 1066 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 MypopQ8R4U1 393 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Xrcc4Q924T3 326 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Creld2Q9CYA0 350 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ube3bQ9ES34 1070 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Kcnh4A2A5F7 1018 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Slc4a1P04919 929 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ces3aQ63880 571 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Slc13a4Q8BZ82 625 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Atad2Q8CDM1 1040 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ces3bQ8VCU1 571 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Klhl10Q9D5V2 608 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Znf287Q9EQB9 759 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Atp12aQ9Z1W8 1035 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Dnajc25A2ALW5 357 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Arhgap4B1AUY3 965 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Stat5bP42232 786 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Rnf187Q8BFX1 236 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Mst1rQ62190 1378 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Exoc3l2D3YUP5 789 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ctr9Q62018 1173 aaKnown RBP12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 PicalmQ7M6Y3 660 aaKnown RBP12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Mei4Q8BRM6 389 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Bola3Q8CEI1 110 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Chaf1aQ9QWF0 911 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Krt24A1L317 512 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 MthfslL7N466 203 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Plcb3P51432 1234 aaKnown RBP12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Rrp1P56183 494 aaKnown RBP12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ankrd13aQ80UP5 588 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ccdc172Q810N9 267 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Amhr2Q8K592 568 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Pcdhgc5Q91XW9 944 aa12.3□□□□□ -0.44
Msh3-201ENSMUST00000022220 Hmx1O70218 332 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Surf1P09925 306 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Evi5P97366 809 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Sp4Q62445 782 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Secisbp2lQ6A098 1086 aaKnown RBP12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ccdc93Q7TQK5 629 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Chd4Q6PDQ2 1915 aaKnown RBP12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Plekhg2Q6KAU7 1340 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Tbc1d4Q8BYJ6 1307 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Gm20425E9Q035 978 aaKnown RBP12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Diaph1O08808 1255 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 NppbP40753 121 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 SrprbP47758 269 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Znf496Q5SXI5 585 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Cnga2Q62398 664 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Tbc1d30Q69ZT9 766 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Mxd3Q80US8 206 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Clic6Q8BHB9 596 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Cdan1Q8CC12 1239 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Tab2Q99K90 693 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Abcb6Q9DC29 842 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Arpp21Q9DCB4 807 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 RabggtaQ9JHK4 567 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Kif13aQ9EQW7 1749 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Setdb1O88974 1307 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 1700006A11RikB9EHI3 544 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Q66JV7 365 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Recql4Q75NR7 1216 aaKnown RBP12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Spata32Q8C5V0 334 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 CerkQ8K4Q7 531 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Cd274Q9EP73 290 aa12.29□□□□□ -0.44
Msh3-201ENSMUST00000022220 Spocd1B1ASB6 936 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Il15P48346 162 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ccdc174Q3U155 467 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Sycp1Q62209 993 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Panx2Q6IMP4 677 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Slx1bQ8BX32 270 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Stag1Q9D3E6 1258 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Polr2dQ9D7M8 142 aaKnown RBP12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Cfap45Q9D9U9 551 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Prpf38aQ4FK66 312 aaKnown RBP12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Pde1cQ64338 706 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Otop3Q80UF9 577 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Col4a3bpQ9EQG9 624 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 A0A1Y7VML8 143 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Odf2A3KGV1 830 aaKnown RBP12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 GalcP54818 684 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Usp28Q5I043 1051 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Themis2Q91YX0 663 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Dynll2Q9D0M5 89 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Tubb4aQ9D6F9 444 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Eid1Q9DCR4 169 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Sos2Q02384 1333 aa12.28□□□□□ -0.44
Msh3-201ENSMUST00000022220 Eef2kO08796 724 aa12.27□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ankrd1Q9CR42 319 aa12.27□□□□□ -0.44
Msh3-201ENSMUST00000022220 Bcl2l12Q9D3J3 255 aa12.27□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms