RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Cep120Q7TSG1 988 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Shisa4Q8CA71 197 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Pdzd9Q9D9M4 266 aa13.72□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Dnajc25A2ALW5 357 aa13.71□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Acad12D3Z7X0 555 aa13.71□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Kifc2O08672 792 aa13.71□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Hmgb2P30681 210 aaKnown RBP13.71□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ranbp1P34022 203 aaKnown RBP13.71□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Atg9aQ68FE2 551 aa13.71□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Cfap100Q80VN0 613 aa13.71□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Haus7Q8BKT8 364 aa13.71□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Syf2Q9D198 242 aaKnown RBP13.71□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ppp2r3dQ9Z176 491 aa13.71□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Gcom1E9PZ54 550 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ampd3O08739 766 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Magea1O89006 320 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Magea5O89009 320 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Traf1P39428 409 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Igfbp6P47880 238 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Kifap3P70188 793 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 MyzapQ3UIJ9 466 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Cct6bQ61390 531 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Asap2Q7SIG6 958 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Sec62Q8BU14 398 aaKnown RBP13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Chmp7Q8R1T1 451 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Gpr108Q91WD0 569 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Pcdhb22Q91XZ8 794 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Trim11Q99PQ2 467 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Magea2Q9R2A2 320 aa13.71□□□□□ -0.22
Ufd1-201ENSMUST00000005394 PappaQ8R4K8 1624 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Col3a1P08121 1464 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Bicdl1A0JNT9 577 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Trim55G3X8Y1 545 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Gabpb2P81069 414 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Smarcc1P97496 1104 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Cep112Q5PR68 954 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Prpf4bQ61136 1007 aaKnown RBP13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Olfr119Q7TRJ5 321 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Lmbrd2Q8C561 694 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Vmn1r218Q8R261 298 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Tubgcp2Q921G8 905 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Akt1s1Q9D1F4 257 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Desi2Q9D291 194 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 SyncQ9EPM5 470 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Hdac6Q9Z2V5 1149 aa13.7□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Vsnl1P62761 191 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Cplx1P63040 134 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Gsdma2Q32M21 443 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Zmym1Q3TJB1 983 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Tax1bp1Q3UKC1 814 aaKnown RBP13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Lamb3Q61087 1168 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Q66JV7 365 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Spty2d1Q68FG3 682 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Atp1a2Q6PIE5 1020 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Dhx38Q80X98 1228 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Fam177a1Q8BR63 207 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 BaatQ91X34 420 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Prpf6Q91YR7 941 aaKnown RBP13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Trap1Q9CQN1 706 aaKnown RBP13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 RpainQ9CWY9 219 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 NapgQ9CWZ7 312 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Baiap2l1Q9DBJ3 514 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Crb1Q8VHS2 1405 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ubr2Q6WKZ8 1755 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Gm42641I6L9G2 585 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Mmp14P53690 582 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ppfia3P60469 1194 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Cplx2P84086 134 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Prl2c1Q5SVL9 228 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ift88Q61371 824 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Rbm12b2Q66JV4 834 aaKnown RBP13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Sdad1Q80UZ2 687 aaKnown RBP13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 AtripQ8BMG1 785 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 VmacQ8BP01 174 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ints5Q8CHT3 1018 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Rbm17Q8JZX4 405 aaKnown RBP13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ssfa2Q922B9 1252 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ciao1Q99KN2 339 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 RarsQ9D0I9 660 aaKnown RBP13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Mfap3lQ9D3X9 409 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Irx5Q9JKQ4 484 aa13.69□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Folh1O35409 752 aa13.68□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Sox5P35710 763 aa13.68□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Evi5P97366 809 aa13.68□□□□□ -0.22
Ufd1-201ENSMUST00000005394 ItpripQ3TNL8 555 aa13.68□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ovgp1Q62010 721 aa13.68□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Adck2Q6NSR3 617 aa13.68□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ankle2Q6P1H6 964 aa13.68□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Snd1Q78PY7 910 aaKnown RBP13.68□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Epc1Q8C9X6 813 aa13.68□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Prl3d2F6R3P9 224 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Acnat2Q8BGG9 420 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Znf771Q8BJ90 317 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Def6Q8C2K1 630 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Alx1Q8C8B0 326 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Spats2Q8K1N4 545 aaKnown RBP13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 PpanQ91YU8 470 aaKnown RBP13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ssr1Q9CY50 286 aaKnown RBP13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 TefQ9JLC6 301 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Trpc5Q9QX29 975 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 170 ms