RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Gm28305F6U473 122 aa10.8□□□□□ -0.68
Ssr1-204ENSMUST00000225319 P0C913 63 aa10.8□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Gm1968Q3T9I3 115 aa10.8□□□□□ -0.68
Ssr1-204ENSMUST00000225319 PdpnQ62011 172 aa10.8□□□□□ -0.68
Ssr1-204ENSMUST00000225319 EsdQ9R0P3 282 aa10.8□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Igkv4-69A0A0B4J1I6 116 aa10.79□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Gm5150Q1AN92 299 aa10.79□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Trappc1Q5NCF2 145 aa10.79□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Ly6g5bQ8K1T4 194 aa10.79□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Tspo2Q9CRZ8 162 aa10.79□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Q9DAB9 146 aa10.79□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Trav14-2A0A075B694 121 aa10.78□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Gm5157A0A087WRH8 301 aa10.78□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Trdv2-1A0A0G2JGB9 116 aa10.78□□□□□ -0.68
Ssr1-204ENSMUST00000225319 MsmbO08540 113 aa10.78□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Srp14P16254 110 aaKnown RBP10.78□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Ang6Q5GAN0 147 aa10.78□□□□□ -0.68
Ssr1-204ENSMUST00000225319 TctaQ8VEA7 122 aa10.78□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Tppp3Q9CRB6 176 aaKnown RBP10.78□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Spcs1Q9D958 161 aa10.78□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Hspb8Q9JK92 196 aa10.78□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Crlf1Q9JM58 425 aa10.78□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Ighv14-1A0A075B5R4 117 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Igkv4-81A0A0G2JEY5 119 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 1520401A03RikA0A0J9YVH6 598 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Gm28038F7BCN9 126 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Cacng7P62956 275 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Cited1P97769 203 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Pmis2Q497Q9 96 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Zfp248Q640N4 576 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Fam222aQ6PGH4 453 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Il22ra1Q80XZ4 581 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Cphx2Q8BX39 182 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Ube2v1Q9CZY3 147 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 PdfS4R2K0 231 aa10.77□□□□□ -0.68
Ssr1-204ENSMUST00000225319 Zfp462B1AWL2 2495 aaKnown RBP10.77□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Tmem238lA0A1B0GS74 79 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Tmem262D3Z338 116 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Defa35E9QLQ1 93 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 PlnP61014 52 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Hnrnpa3Q8BG05 379 aaKnown RBP10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Klk15Q8CGR4 254 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Rnf183Q8QZS5 190 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Q9D131 166 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Gm26938S4R185 226 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 A0A1Y7VMQ4 148 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Rnase1P00683 149 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Cd69P37217 199 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 MycbQ6P8Z1 170 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Tctex1d4Q8CDY7 219 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 NpbQ8K4P1 119 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Cd99Q8VCN6 175 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Tctex1d2Q9CQ66 144 aa10.76□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Helz2E9QAM5 2947 aaKnown RBP10.75□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Tnfrsf9P20334 256 aa10.75□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Runx1Q03347 451 aa10.75□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Odf1Q61999 247 aa10.75□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Slc35d2Q762D5 326 aa10.75□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Olfr498Q8VEW2 330 aa10.75□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Mcrip2Q9CQB2 160 aaKnown RBP10.75□□□□□ -0.69
Ssr1-204ENSMUST00000225319 3110018I06RikQ9CXS0 120 aa10.75□□□□□ -0.69
Ssr1-204ENSMUST00000225319 CtrlQ9ER05 264 aa10.75□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Nit2Q9JHW2 276 aa10.75□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Ighv1-82A0A0G2JEU7 117 aa10.74□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Gm16442D3YZG3 307 aa10.74□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Gm10553J3QPF1 123 aa10.74□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Tmem136Q3TYE7 245 aa10.74□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Q4KKZ1 196 aa10.74□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Olfr311Q5NC59 308 aa10.74□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Ammecr1lQ8JZZ6 310 aa10.74□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Ighv12-3A0A075B5T1 117 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Trav16d-dv11A0A075B617 117 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Igkv4-70A0A0B4J1I5 116 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Trbv14A0A140T8L9 115 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Hsbp1l1B2RXB2 72 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Gng4P50153 75 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Odf3Q920N1 254 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Ucn2Q99ML8 113 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 OtorQ9JIE3 128 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 CicQ924A2 2510 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Cd24P24807 76 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Spink2Q8BMY7 86 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Ndufc2Q9CQ54 120 aa10.73□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Ighv1-62-2A0A0A6YXZ4 119 aa10.72□□□□□ -0.69
Ssr1-204ENSMUST00000225319 A930009A15RikG3UYI6 118 aa10.72□□□□□ -0.69
Ssr1-204ENSMUST00000225319 CrxO54751 299 aa10.72□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Wfdc15aQ8BH89 80 aa10.72□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Gpx7Q99LJ6 186 aa10.72□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Sec11aQ9R0P6 179 aa10.72□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Ighv1-9A0A0A6YW37 117 aa10.71□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Ceacam15A0A0B4J1L0 234 aa10.71□□□□□ -0.69
Ssr1-204ENSMUST00000225319 H2al2bA9Z055 111 aa10.71□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Q3UNZ8 350 aa10.71□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Defa22Q8C1N8 93 aa10.71□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Olfr1367Q8VFG2 316 aa10.71□□□□□ -0.69
Ssr1-204ENSMUST00000225319 Setd2E9Q5F9 2537 aa10.71□□□□□ -0.7
Ssr1-204ENSMUST00000225319 Ighv1-64A0A075B5X3 117 aa10.7□□□□□ -0.7
Ssr1-204ENSMUST00000225319 Vsig4F6TUL9 280 aa10.7□□□□□ -0.7
Ssr1-204ENSMUST00000225319 Ighv1-62-3P01754 117 aa10.7□□□□□ -0.7
Ssr1-204ENSMUST00000225319 Psmb8P28063 276 aa10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms