RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Ramp1Q9WTJ5 148 aa10.29□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Trav14d-1A0A075B6B1 121 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Omt2bD3YX29 119 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 P01736 120 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 CrygcQ61597 174 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Tmem141A2AJB2 108 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Umad1E0CX23 159 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Ifitm2Q99J93 144 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Fam241bQ9D882 120 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Lmo4P61969 165 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Atp5lQ9CPQ8 103 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Cxcl14Q9WUQ5 99 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Col5a1O88207 1838 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Gm15557A6PWY0 234 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 SbpP15501 199 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Pip4p1Q3TWL2 284 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Zmat4Q8BZ94 229 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 MturnQ8CGA4 131 aa10.28□□□□□ -0.76
Pdgfra-205ENSMUST00000201711 Ighv1-4A0A075B5T4 117 aa10.27□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 PlnP61014 52 aa10.27□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Rbx1P62878 108 aa10.27□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm9944Q8C559 102 aa10.27□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm26566Q8CAC1 153 aa10.27□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Bub3Q9WVA3 326 aa10.27□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Bex1Q9R224 128 aa10.26□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gp9O88186 177 aa10.26□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Adgrg4B7ZCC9 3073 aa10.26□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm33815A0A087WNV3 176 aa10.26□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Tex26Q0VB26 296 aa10.26□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Klhdc1Q80YG3 406 aa10.26□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Dmrtc2Q8CGW9 370 aa10.26□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gpx7Q99LJ6 186 aa10.26□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Ighv6-7A0A0A6YWU3 119 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Ighv8-8A0A0A6YXQ0 119 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm17732E9Q5I2 61 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm5294J3QP53 216 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Olfr498Q8VEW2 330 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Klk7Q91VE3 249 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Fam240bJ3QMB3 78 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Edn2P22389 175 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Srsf1Q6PDM2 248 aaKnown RBP10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm12689Q8BQU9 117 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Ube2e2Q91W82 201 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Rs1Q9Z1L4 224 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm37988J3QM41 62 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Zfand3Q497H0 227 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 MycbQ6P8Z1 170 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Ndufc2Q9CQ54 120 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Slamf6Q9ET39 351 aa10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Slc25a20Q9Z2Z6 301 aaKnown RBP10.25□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Trdv5A0A075B661 115 aa10.24□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Foxi1Q922I5 372 aa10.24□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gtsf1lQ9CWD0 151 aa10.24□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Mtatp8P03930 67 aa10.24□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 NpyP57774 97 aa10.24□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Trav14n-2A0A0G2JDF5 121 aa10.24□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Hoxb4P10284 250 aa10.24□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Igkv4-57A0A0A6YYE7 117 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm17359A0A0G2JEB7 487 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Pla2g2eQ9QUL3 142 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 4930447F04RikA2AFR2 126 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm5150Q1AN92 299 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 BC106179Q8C9L1 186 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Bak1O08734 209 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 P01812 117 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm29289A0A087WPY7 166 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm4064A0A087WR82 380 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm10352B2RWR6 380 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm21693J3QK27 380 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Rbmy1a1O35698 380 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Tomm6Q9CQN3 74 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 OtorQ9JIE3 128 aa10.23□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 P01794 123 aa10.22□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Igkv4-57-1A0A075B5M4 119 aa10.22□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Pla2g2cP48076 150 aa10.22□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Trav7-2Q5R1I3 112 aa10.22□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm9913Q8BQQ2 135 aa10.22□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Trbv13-1A0A0B4J1P8 112 aa10.22□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gpx1P11352 201 aa10.22□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gpr82Q8BZR0 328 aa10.22□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 TroQ6DIC6 2087 aa10.21□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm35549A0A0N4SUS7 141 aa10.21□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Rasl10aQ8K5A4 203 aa10.21□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Mcrip2Q9CQB2 160 aaKnown RBP10.21□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 PmvkQ9D1G2 192 aa10.21□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Gm26938S4R185 226 aa10.21□□□□□ -0.77
Pdgfra-205ENSMUST00000201711 Ighv14-1A0A075B5R4 117 aa10.21□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ighv1-77A0A0G2JGS9 117 aa10.21□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Lyrm7Q9DA03 104 aa10.21□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ccl21aP84444 133 aa10.2□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ccl21bP86792 133 aa10.2□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ccl21cP86793 133 aa10.2□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Gata4Q08369 441 aa10.2□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Defb18Q30KP5 85 aa10.2□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ovol2Q8CIV7 274 aa10.2□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Gnb1lQ9EQ15 326 aa10.2□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Nit2Q9JHW2 276 aa10.2□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Gm20517G3UVU6 152 aa10.2□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Spink1P09036 80 aa10.2□□□□□ -0.78
Pdgfra-205ENSMUST00000201711 Ovol3D3YYM0 189 aa10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 73.3 ms