RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Sptan1P16546 2472 aaKnown RBP13.25□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Igf1P05017 153 aa13.25□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Prr3Q811B5 190 aaKnown RBP13.25□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Fhl3Q9R059 289 aa13.24□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Ighv1-20A0A0A6YX66 117 aa13.24□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Igkv4-81A0A0G2JEY5 119 aa13.24□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Srsf2Q62093 221 aaKnown RBP13.24□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Inafm2A0A1L1STD6 152 aa13.24□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Gm10775Q3V290 127 aa13.24□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Spink12Q9D256 87 aa13.24□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Gvin1Q80SU7 2427 aa13.24□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Rchy1Q9CR50 261 aa13.24□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Igkv6-15A0A140T8M5 115 aa13.23□□□□□ -0.29
Col17a1-201ENSMUST00000026045 7420426K07RikQ3UX66 186 aa13.23□□□□□ -0.29
Col17a1-201ENSMUST00000026045 FancmQ8BGE5 2021 aa13.23□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Pgpep1lQ9CWB5 130 aa13.23□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Pfn2Q9JJV2 140 aa13.23□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Trip12G5E870 2025 aaKnown RBP13.23□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Col4a6B1AVK5 1691 aa13.23□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Igkv4-57-1A0A075B5M4 119 aa13.23□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Zfp648D3Z0W3 525 aa13.23□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Spata46Q4FZF2 204 aa13.23□□□□□ -0.29
Col17a1-201ENSMUST00000026045 C920008G01RikA0A0B4J1N1 112 aa13.22□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Lage3Q9CR70 148 aa13.22□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Myod1P10085 318 aa13.22□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Gm19410A0A140LJC7 2098 aa13.22□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Gm17359A0A0G2JEB7 487 aa13.22□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Vpreb2P13373 142 aa13.22□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Greb1Q3UHK3 1954 aa13.22□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Gm1968Q3T9I3 115 aa13.22□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Zfp407G3UVV3 2246 aa13.21□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Ighv1-31A0A0A6YWK5 117 aa13.21□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Rmi2Q3UPE3 149 aa13.21□□□□□ -0.29
Col17a1-201ENSMUST00000026045 PtprsB0V2N1 1907 aa13.21□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Svs5P30933 122 aa13.21□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Mrps21P58059 87 aa13.21□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Gm10295Q8CCF3 114 aa13.21□□□□□ -0.29
Col17a1-201ENSMUST00000026045 Trav11A0A0B4J1J9 114 aa13.21□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Msrb2Q78J03 175 aa13.21□□□□□ -0.3
Col17a1-201ENSMUST00000026045 3110021N24RikJ3QMN2 152 aa13.21□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Ighv1-62-3P01754 117 aa13.21□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Ndufa1O35683 70 aa13.2□□□□□ -0.3
Col17a1-201ENSMUST00000026045 BikO70337 150 aa13.2□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Foxi2Q3I5G5 311 aa13.2□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Q9DAQ5 155 aa13.2□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Fam208bQ5DTT3 2382 aa13.2□□□□□ -0.3
Col17a1-201ENSMUST00000026045 P01837 106 aa13.2□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Ighv1-23A0A0A6YVW3 117 aa13.2□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Defb29Q8BGW9 78 aa13.2□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Mpv17l2Q8VIK2 200 aa13.2□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Stpg1Q9D2F5 341 aa13.2□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Trav14d-3-dv8A0A075B619 120 aa13.19□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Parp4E9PYK3 1969 aa13.19□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Olfr311Q5NC59 308 aa13.19□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Cysrt1Q9D1E4 142 aa13.19□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Rpl36aP83882 106 aaKnown RBP13.19□□□□□ -0.3
Col17a1-201ENSMUST00000026045 MifP34884 115 aaKnown RBP13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Tomm7Q9D173 55 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Tpsg1Q9QUL7 311 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Plxnb3Q9QY40 1902 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Igkv4-68A0A0B4J1I7 117 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 SelenowP63300 88 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Ndufb4Q9CQC7 129 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Tmem86bQ497J1 226 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Fhl4Q8CDC8 279 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Tmem14cQ9CQN6 114 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Iglv1A0A075B663 117 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 P04219 140 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Lyrm9Q3UN90 78 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 NpbQ8K4P1 119 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 ColqO35348 457 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Hoxd3P09027 433 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Edn1P22387 202 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 CenpwQ3URR0 86 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Gm4763Q8CFJ5 196 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Sec16aA2AIX1 2377 aa13.18□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Dennd4cA6H8H2 1906 aa13.17□□□□□ -0.3
Col17a1-201ENSMUST00000026045 P01674 108 aa13.16□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Rp1l1Q8CGM2 1859 aa13.16□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Plxnb1Q8CJH3 2119 aa13.16□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Ndufa11Q9D8B4 141 aa13.16□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Morn5Q9DAI9 170 aa13.16□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Arhgap21Q6DFV3 1944 aa13.16□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Ighv1-9A0A0A6YW37 117 aa13.16□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Gm10251J3QPM5 127 aa13.16□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Spsb3Q571F5 354 aa13.16□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Ighv1-49A0A0A6YWX2 117 aa13.15□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Edn2P22389 175 aa13.15□□□□□ -0.3
Col17a1-201ENSMUST00000026045 9430069I07RikQ9CX21 111 aa13.15□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Glrp1E9Q9S8 174 aa13.15□□□□□ -0.3
Col17a1-201ENSMUST00000026045 9930022D16RikQ8BG27 128 aa13.15□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Gm10337F7DEP7 55 aa13.15□□□□□ -0.3
Col17a1-201ENSMUST00000026045 P01649 108 aa13.15□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Wfdc11A2A5H7 82 aa13.15□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Defb30Q30KN4 75 aa13.15□□□□□ -0.3
Col17a1-201ENSMUST00000026045 Igkv4-80A0A075B5L7 116 aa13.15□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Ighv1-39A0A075B5V5 117 aa13.15□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Ndufa12Q7TMF3 145 aaKnown RBP13.15□□□□□ -0.31
Col17a1-201ENSMUST00000026045 Dopey2Q3UHQ6 2295 aa13.14□□□□□ -0.31
Col17a1-201ENSMUST00000026045 E130218I03RikA0A0U1RNU5 63 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms