RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Ndufa4Q62425 82 aaKnown RBP13.61□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 P01812 117 aa13.6□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 P18532 116 aa13.59□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Sumo2P61957 95 aaKnown RBP13.59□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Tmem170bP86050 132 aa13.59□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Gm1553Q66VB7 94 aa13.59□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 RhohQ9D3G9 191 aa13.59□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Zfhx4Q9JJN2 3550 aa13.59□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Zzef1Q5SSH7 2924 aa13.59□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Ighv1-81A0A075B5Y4 117 aa13.59□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Tmem30bQ8BHG3 353 aa13.59□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Gm42674D3YUT9 64 aa13.58□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 CrygbP04344 175 aa13.58□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Q9D8Q6 235 aa13.58□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Ccl24Q9JKC0 119 aa13.58□□□□□ -0.23
Sqstm1-201ENSMUST00000015981 Bub3Q9WVA3 326 aa13.58□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Trav21-dv12A0A075B6C4 109 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Prok1Q14A28 105 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Map6d1Q14BB9 191 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Ighv1-4A0A075B5T4 117 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Igkv4-71A0A0G2JEH0 117 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Gm6812B1AXU1 112 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 SrarpQ3ULG3 163 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Ss18Q62280 418 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Dpm2Q9Z324 84 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Obp2bA2BHR0 176 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 CntfrO88507 372 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Hist1h1tQ07133 208 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Il1f10Q8R459 152 aa13.57□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 P01725 110 aa13.56□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Ubald2Q8BQH4 164 aa13.56□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Tac4Q99N14 128 aa13.56□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Gm10192Q3V0S1 108 aa13.56□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Samd5Q3V1H9 173 aa13.56□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Q9CQM1 111 aa13.56□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Tmem14cQ9CQN6 114 aa13.56□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Wisp2Q9Z0G4 251 aa13.56□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Gm5878E9PUB3 99 aa13.55□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 ColqO35348 457 aa13.55□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Lgals6O54891 301 aa13.55□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 TshbP12656 138 aa13.55□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Olfr313Q5NC55 308 aa13.55□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Gkn1Q9CR36 201 aa13.55□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Sptbn2Q68FG2 2388 aa13.54□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Igkv4-90A0A075B5L3 117 aa13.54□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Ighv1-53A0A075B5W3 117 aa13.54□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 9130230L23RikQ8CC80 163 aa13.54□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Gvin1Q80SU7 2427 aa13.54□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Igkv4-59A0A0B4J1I8 117 aa13.54□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 1700056E22RikF7CNM6 234 aa13.54□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 1700020N15RikL7MTX3 112 aa13.54□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Sdhaf1Q3U276 118 aa13.54□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Gpr82Q8BZR0 328 aa13.54□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Klk13Q8CGR6 276 aa13.54□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Trav4n-4A0A075B615 110 aa13.53□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Esp24A8R0V6 68 aa13.53□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 BokO35425 213 aa13.53□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Psmb11Q8BG41 302 aa13.53□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Cysltr1Q99JA4 352 aa13.53□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Triap1Q9D8Z2 76 aa13.53□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Prrc2cQ3TLH4 2846 aaKnown RBP13.53□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Cnot1Q6ZQ08 2375 aaKnown RBP13.53□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Gm9961Q8BNV2 113 aa13.53□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 G430095P16RikE9Q913 147 aa13.52□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Gm5629P06327 117 aa13.52□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Hif1anQ8BLR9 349 aa13.52□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 Mzt1Q8BUR9 78 aa13.52□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 AcacaQ5SWU9 2345 aa13.52□□□□□ -0.24
Sqstm1-201ENSMUST00000015981 2310009B15RikA0A0A6YWI4 143 aa13.52□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Defa-rs2P17534 91 aa13.52□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Ifi27l2aQ8R412 90 aa13.52□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Tmem262D3Z338 116 aa13.51□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 S100a4P07091 101 aa13.51□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Rpl13aP19253 203 aaKnown RBP13.51□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 A130051J06RikQ8CAU1 227 aa13.51□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Lypd8Q9D7S0 255 aa13.51□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Ighv3-4A0A0A6YXF1 117 aa13.51□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 LoxP28301 411 aa13.51□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Foxi2Q3I5G5 311 aa13.51□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 4930447F04RikA2AFR2 126 aa13.5□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 CckP09240 115 aa13.5□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Gm10271F6WY25 52 aa13.5□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Mrpl36Q99N90 102 aa13.5□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Igkv2-137A0A0B4J1H6 120 aa13.49□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Mllt11P97783 90 aa13.49□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Rab37Q9JKM7 223 aa13.49□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Ighv1-9A0A0A6YW37 117 aa13.49□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 ElaneQ3UP87 265 aa13.49□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Scgb1b2O35176 93 aa13.48□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Cdkn1aP39689 159 aa13.48□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Fhl1P97447 280 aaKnown RBP13.48□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Tmem213Q08EA8 116 aa13.48□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Rpl36-ps4A0A140T8U4 117 aa13.48□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Ighv1-31A0A0A6YWK5 117 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Gm10036E9PYL9 178 aaKnown RBP13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Minos1Q7TNS2 76 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Tmem219Q9D123 240 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Ighv12-3A0A075B5T1 117 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Gm28539A0A087WSL9 92 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 NpwA0A1L1STR8 176 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms