RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 TctaQ8VEA7 122 aa12.8□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Tmem14cQ9CQN6 114 aa12.8□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Ighv1-9A0A0A6YW37 117 aa12.8□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Mllt11P97783 90 aa12.79□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Trav7-2Q5R1I3 112 aa12.79□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Pradc1Q9D9N8 188 aa12.79□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Ighv3-1A0A075B5S6 116 aa12.79□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Scgb1b2O35176 93 aa12.79□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Gm45785A0A1B0GT05 94 aa12.78□□□□□ -0.36
Ctcf-201ENSMUST00000005841 CntfrO88507 372 aa12.78□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Obp2aQ8K1H9 176 aa12.78□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Ccl24Q9JKC0 119 aa12.78□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Gm6525A0A0A6YW33 106 aa12.77□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Cnih1O35372 144 aa12.77□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Arpc1aQ9R0Q6 370 aa12.77□□□□□ -0.36
Ctcf-201ENSMUST00000005841 Hif1anQ8BLR9 349 aa12.77□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Rpl32P62911 135 aaKnown RBP12.77□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Tmem213Q08EA8 116 aa12.77□□□□□ -0.37
Ctcf-201ENSMUST00000005841 MdfiP70331 251 aa12.76□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Foxi1Q922I5 372 aa12.76□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Plac1Q9JI83 173 aa12.76□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Csn3P06796 181 aa12.76□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Gm21370Q3T9V6 190 aa12.76□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Gm10735Q3US96 136 aa12.76□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Zfand3Q497H0 227 aa12.76□□□□□ -0.37
Ctcf-201ENSMUST00000005841 PolP10400 120 aa12.75□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Sumo2P61957 95 aaKnown RBP12.75□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Ormdl2Q9CQZ0 153 aa12.75□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Uqcrfs1Q9CR68 274 aa12.75□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Minos1Q7TNS2 76 aa12.75□□□□□ -0.37
Ctcf-201ENSMUST00000005841 LrbaQ9ESE1 2856 aa12.75□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Trav4n-4A0A075B615 110 aa12.75□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Ighv3-3A0A0A6YWL2 116 aa12.75□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Gm42674D3YUT9 64 aa12.75□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Tcrg-C3L7N479 172 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Gm26661M0QWV4 156 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 P03985 172 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 4930596D02RikQ3V0H9 216 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Gemin7Q9CWY4 129 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Gm12888Q3UW77 119 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Klhdc1Q80YG3 406 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Ovol2Q8CIV7 274 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Lypd8Q9D7S0 255 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Pcnx1Q9QYC1 2344 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Ighv1-31A0A0A6YWK5 117 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Gm6812B1AXU1 112 aa12.74□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Olfr313Q5NC55 308 aa12.73□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Klk15Q8CGR4 254 aa12.73□□□□□ -0.37
Ctcf-201ENSMUST00000005841 ManfQ9CXI5 179 aaKnown RBP12.73□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Rs1Q9Z1L4 224 aa12.73□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Ighv1-75A0A075B5Y2 117 aa12.73□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Spink2Q8BMY7 86 aa12.73□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Triap1Q9D8Z2 76 aa12.73□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Wfdc15bQ9JHY4 80 aa12.73□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Tmem262D3Z338 116 aa12.72□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Mrps21P58059 87 aa12.72□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Spata46Q4FZF2 204 aa12.72□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Trbv17A0A140T8P8 114 aa12.72□□□□□ -0.37
Ctcf-201ENSMUST00000005841 D930048N14RikA2AA67 225 aa12.72□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Sertad4A7DTG3 377 aa12.72□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Prok1Q14A28 105 aa12.72□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Crip2Q9DCT8 208 aaKnown RBP12.72□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Dpm2Q9Z324 84 aa12.71□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Gm2174F6ZVF2 133 aa12.71□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Mrpl16Q99N93 251 aa12.71□□□□□ -0.37
Ctcf-201ENSMUST00000005841 Psmb8P28063 276 aa12.71□□□□□ -0.38
Ctcf-201ENSMUST00000005841 NrepQ07475 68 aa12.71□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Anapc13Q8R034 74 aa12.71□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Mrpl36Q99N90 102 aa12.71□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Bdp1Q571C7 2467 aa12.7□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Ighv14-1A0A075B5R4 117 aa12.7□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Polr2kQ63871 58 aa12.7□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Gm10135F6TEE5 83 aa12.7□□□□□ -0.38
Ctcf-201ENSMUST00000005841 B230104I21RikQ3USW4 141 aa12.7□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Nhlrc1Q8BR37 401 aa12.7□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Defa-rs2P17534 91 aa12.7□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Sptbn2Q68FG2 2388 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Ighv1-5A0A0A6YWG2 117 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Onecut1O08755 465 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Ccl6P27784 116 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Defa3P28310 93 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Defa10P50708 93 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Defa15P50713 93 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Fam24aQ8CF27 98 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Abca1P41233 2261 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Svs5P30933 122 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Tln2Q71LX4 2375 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Ighv1-66A0A075B5X5 117 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Ighv1-82A0A0G2JEU7 117 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 A730046J19RikA0A1B0GSN8 89 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Parm1Q923D3 296 aa12.69□□□□□ -0.38
Ctcf-201ENSMUST00000005841 2310009B15RikA0A0A6YWI4 143 aa12.68□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Ins1P01325 108 aa12.68□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Foxi2Q3I5G5 311 aa12.68□□□□□ -0.38
Ctcf-201ENSMUST00000005841 TprF6ZDS4 2431 aaKnown RBP12.68□□□□□ -0.38
Ctcf-201ENSMUST00000005841 P84751 237 aa12.68□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Ighv4-1A0A075B5R5 116 aa12.67□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Khdc1cQ4KL78 166 aa12.67□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Gm6040Q4QY32 63 aa12.67□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Cysltr1Q99JA4 352 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 88.9 ms