RNA–Protein interactions for RNA: ENST00000642077.1

CASC19-276, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 993 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-276ENST00000642077 MT1HP80294 61 aa3.41□□□□□ -1.86
CASC19-276ENST00000642077 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
CASC19-276ENST00000642077 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
CASC19-276ENST00000642077 LINC01554Q52M75 96 aa3.39□□□□□ -1.87
CASC19-276ENST00000642077 SPRR2GQ9BYE4 73 aa3.37□□□□□ -1.87
CASC19-276ENST00000642077 M0R2T5 61 aa3.34□□□□□ -1.87
CASC19-276ENST00000642077 MT2AP02795 61 aa3.31□□□□□ -1.88
CASC19-276ENST00000642077 C10orf95Q9H7T3 257 aa3.3□□□□□ -1.88
CASC19-276ENST00000642077 MT1FP04733 61 aa3.28□□□□□ -1.88
CASC19-276ENST00000642077 MUC2Q02817 5179 aa3.27□□□□□ -1.89
CASC19-276ENST00000642077 KRTAP10-10P60014 251 aa3.27□□□□□ -1.89
CASC19-276ENST00000642077 KRTAP19-8Q3LI54 63 aa3.27□□□□□ -1.89
CASC19-276ENST00000642077 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
CASC19-276ENST00000642077 PLAC4Q8WY50 150 aa3.26□□□□□ -1.89
CASC19-276ENST00000642077 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
CASC19-276ENST00000642077 TNP1P09430 55 aa3.2□□□□□ -1.9
CASC19-276ENST00000642077 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
CASC19-276ENST00000642077 UBR4Q5T4S7 5183 aa3.19□□□□□ -1.9
CASC19-276ENST00000642077 FAT4Q6V0I7 4981 aa3.17□□□□□ -1.9
CASC19-276ENST00000642077 MT1BP07438 61 aa3.17□□□□□ -1.9
CASC19-276ENST00000642077 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
CASC19-276ENST00000642077 MT1XP80297 61 aa3.1□□□□□ -1.91
CASC19-276ENST00000642077 PRO2289Q9P1D8 64 aa3.08□□□□□ -1.92
CASC19-276ENST00000642077 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
CASC19-276ENST00000642077 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
CASC19-276ENST00000642077 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CASC19-276ENST00000642077 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
CASC19-276ENST00000642077 KRTAP19-6Q3LI70 58 aa2.89□□□□□ -1.95
CASC19-276ENST00000642077 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
CASC19-276ENST00000642077 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
CASC19-276ENST00000642077 USH2AO75445 5202 aa2.77□□□□□ -1.97
CASC19-276ENST00000642077 KRTAP19-7Q3SYF9 63 aa2.76□□□□□ -1.97
CASC19-276ENST00000642077 SSPOA2VEC9 5147 aa2.74□□□□□ -1.97
CASC19-276ENST00000642077 MT1EP04732 61 aa2.71□□□□□ -1.98
CASC19-276ENST00000642077 MT1LQ93083 61 aa2.68□□□□□ -1.98
CASC19-276ENST00000642077 MT1GP13640 62 aa2.59□□□□□ -1.99
CASC19-276ENST00000642077 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
CASC19-276ENST00000642077 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
CASC19-276ENST00000642077 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
CASC19-276ENST00000642077 MT1MQ8N339 61 aa2.54□□□□□ -2
CASC19-276ENST00000642077 KMT2DO14686 5537 aa2.54□□□□□ -2
CASC19-276ENST00000642077 SPRR2FQ96RM1 72 aa2.51□□□□□ -2.01
CASC19-276ENST00000642077 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
CASC19-276ENST00000642077 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
CASC19-276ENST00000642077 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
CASC19-276ENST00000642077 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
CASC19-276ENST00000642077 INE1O15225 51 aa2.46□□□□□ -2.02
CASC19-276ENST00000642077 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
CASC19-276ENST00000642077 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
CASC19-276ENST00000642077 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
CASC19-276ENST00000642077 FSIP2Q5CZC0 6907 aa2.36□□□□□ -2.03
CASC19-276ENST00000642077 SPRR2EP22531 72 aa2.35□□□□□ -2.03
CASC19-276ENST00000642077 SPRR2BP35325 72 aa2.35□□□□□ -2.03
CASC19-276ENST00000642077 SPRR2AP35326 72 aa2.35□□□□□ -2.03
CASC19-276ENST00000642077 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
CASC19-276ENST00000642077 MT1AP04731 61 aa2.3□□□□□ -2.04
CASC19-276ENST00000642077 SPRR2DP22532 72 aa2.27□□□□□ -2.05
CASC19-276ENST00000642077 MACF1Q9UPN3 7388 aaKnown RBP2.24□□□□□ -2.05
CASC19-276ENST00000642077 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
CASC19-276ENST00000642077 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
CASC19-276ENST00000642077 SYNE2Q8WXH0 6885 aaKnown RBP2.09□□□□□ -2.08
CASC19-276ENST00000642077 DSTQ03001 7570 aaKnown RBP2.02□□□□□ -2.09
CASC19-276ENST00000642077 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
CASC19-276ENST00000642077 NEBP20929 6669 aa1.98□□□□□ -2.09
CASC19-276ENST00000642077 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
CASC19-276ENST00000642077 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
CASC19-276ENST00000642077 KRTAP20-1Q3LI63 56 aa1.96□□□□□ -2.1
CASC19-276ENST00000642077 MT4P47944 62 aa1.92□□□□□ -2.1
CASC19-276ENST00000642077 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.1
CASC19-276ENST00000642077 PRM1P04553 51 aa1.8□□□□□ -2.12
CASC19-276ENST00000642077 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
CASC19-276ENST00000642077 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
CASC19-276ENST00000642077 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
CASC19-276ENST00000642077 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
CASC19-276ENST00000642077 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
CASC19-276ENST00000642077 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
CASC19-276ENST00000642077 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
CASC19-276ENST00000642077 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms