RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 ABCA13Q86UQ4 5058 aa2.76□□□□□ -1.97
CASC19-243ENST00000641588 KRTAP19-2Q3LHN2 52 aa2.72□□□□□ -1.97
CASC19-243ENST00000641588 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
CASC19-243ENST00000641588 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
CASC19-243ENST00000641588 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
CASC19-243ENST00000641588 HERC1Q15751 4861 aa2.67□□□□□ -1.98
CASC19-243ENST00000641588 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
CASC19-243ENST00000641588 KRTAP4-1Q9BYQ7 146 aa2.62□□□□□ -1.99
CASC19-243ENST00000641588 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -1.99
CASC19-243ENST00000641588 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -1.99
CASC19-243ENST00000641588 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
CASC19-243ENST00000641588 LRP2P98164 4655 aa2.58□□□□□ -2
CASC19-243ENST00000641588 HMCN2Q8NDA2 5059 aa2.58□□□□□ -2
CASC19-243ENST00000641588 MUC17Q685J3 4493 aa2.56□□□□□ -2
CASC19-243ENST00000641588 KRTAP19-8Q3LI54 63 aa2.54□□□□□ -2
CASC19-243ENST00000641588 LPAP08519 4548 aa2.53□□□□□ -2.01
CASC19-243ENST00000641588 M0R2T5 61 aa2.5□□□□□ -2.01
CASC19-243ENST00000641588 MT1XP80297 61 aa2.46□□□□□ -2.02
CASC19-243ENST00000641588 MUC2Q02817 5179 aa2.44□□□□□ -2.02
CASC19-243ENST00000641588 RNF213Q63HN8 5207 aa2.43□□□□□ -2.02
CASC19-243ENST00000641588 KRTAP19-5Q3LI72 72 aa2.4□□□□□ -2.03
CASC19-243ENST00000641588 MT1BP07438 61 aa2.39□□□□□ -2.03
CASC19-243ENST00000641588 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
CASC19-243ENST00000641588 MT2AP02795 61 aa2.36□□□□□ -2.03
CASC19-243ENST00000641588 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
CASC19-243ENST00000641588 MT1FP04733 61 aa2.33□□□□□ -2.04
CASC19-243ENST00000641588 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
CASC19-243ENST00000641588 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
CASC19-243ENST00000641588 MT1HP80294 61 aa2.27□□□□□ -2.05
CASC19-243ENST00000641588 MT1EP04732 61 aa2.22□□□□□ -2.05
CASC19-243ENST00000641588 MT1LQ93083 61 aa2.2□□□□□ -2.06
CASC19-243ENST00000641588 KRTAP19-7Q3SYF9 63 aa2.18□□□□□ -2.06
CASC19-243ENST00000641588 MT1AP04731 61 aa2.16□□□□□ -2.06
CASC19-243ENST00000641588 KRTAP6-3Q3LI67 103 aa2.15□□□□□ -2.07
CASC19-243ENST00000641588 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
CASC19-243ENST00000641588 CRCT1Q9UGL9 99 aa2.07□□□□□ -2.08
CASC19-243ENST00000641588 FSIP2Q5CZC0 6907 aa2.07□□□□□ -2.08
CASC19-243ENST00000641588 PRM1P04553 51 aa2.07□□□□□ -2.08
CASC19-243ENST00000641588 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
CASC19-243ENST00000641588 USH2AO75445 5202 aa2.03□□□□□ -2.08
CASC19-243ENST00000641588 SSPOA2VEC9 5147 aa2□□□□□ -2.09
CASC19-243ENST00000641588 MT1GP13640 62 aa1.99□□□□□ -2.09
CASC19-243ENST00000641588 NEBP20929 6669 aa1.97□□□□□ -2.09
CASC19-243ENST00000641588 LCE1CQ5T751 118 aa1.96□□□□□ -2.09
CASC19-243ENST00000641588 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.09
CASC19-243ENST00000641588 MT1MQ8N339 61 aa1.96□□□□□ -2.1
CASC19-243ENST00000641588 FCGBPQ9Y6R7 5405 aaPredicted RBP1.94□□□□□ -2.1
CASC19-243ENST00000641588 SPRR2FQ96RM1 72 aa1.93□□□□□ -2.1
CASC19-243ENST00000641588 KRTAP19-6Q3LI70 58 aa1.92□□□□□ -2.1
CASC19-243ENST00000641588 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
CASC19-243ENST00000641588 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
CASC19-243ENST00000641588 SYNE2Q8WXH0 6885 aaKnown RBP1.87□□□□□ -2.11
CASC19-243ENST00000641588 SPRR2AP35326 72 aa1.86□□□□□ -2.11
CASC19-243ENST00000641588 SYNE1Q8NF91 8797 aaKnown RBP1.86□□□□□ -2.11
CASC19-243ENST00000641588 MACF1Q9UPN3 7388 aaKnown RBP1.85□□□□□ -2.11
CASC19-243ENST00000641588 KRTAP20-1Q3LI63 56 aa1.81□□□□□ -2.12
CASC19-243ENST00000641588 KMT2DO14686 5537 aa1.8□□□□□ -2.12
CASC19-243ENST00000641588 SPRR2BP35325 72 aa1.8□□□□□ -2.12
CASC19-243ENST00000641588 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
CASC19-243ENST00000641588 SPRR2EP22531 72 aa1.77□□□□□ -2.13
CASC19-243ENST00000641588 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
CASC19-243ENST00000641588 SPRR2DP22532 72 aa1.73□□□□□ -2.13
CASC19-243ENST00000641588 MDN1Q9NU22 5596 aa1.72□□□□□ -2.13
CASC19-243ENST00000641588 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
CASC19-243ENST00000641588 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
CASC19-243ENST00000641588 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
CASC19-243ENST00000641588 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
CASC19-243ENST00000641588 DSTQ03001 7570 aaKnown RBP1.57□□□□□ -2.16
CASC19-243ENST00000641588 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
CASC19-243ENST00000641588 KRTAP5-10Q6L8G5 202 aa1.47□□□□□ -2.17
CASC19-243ENST00000641588 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
CASC19-243ENST00000641588 MUC5ACP98088 5654 aa1.39□□□□□ -2.19
CASC19-243ENST00000641588 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
CASC19-243ENST00000641588 MT4P47944 62 aa1.35□□□□□ -2.19
CASC19-243ENST00000641588 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
CASC19-243ENST00000641588 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
CASC19-243ENST00000641588 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 43.7 ms