RNA–Protein interactions for RNA: ENST00000641336.1

SAMMSON-213, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,521 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-213ENST00000641336 LRP1Q07954 4544 aaKnown RBP2.19□□□□□ -2.06
SAMMSON-213ENST00000641336 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
SAMMSON-213ENST00000641336 KRTAP10-10P60014 251 aa2.15□□□□□ -2.07
SAMMSON-213ENST00000641336 MT1HL1P0DM35 61 aa2.14□□□□□ -2.07
SAMMSON-213ENST00000641336 RNF213Q63HN8 5207 aa2.13□□□□□ -2.07
SAMMSON-213ENST00000641336 LRP2P98164 4655 aa2.08□□□□□ -2.08
SAMMSON-213ENST00000641336 LPAP08519 4548 aa2.05□□□□□ -2.08
SAMMSON-213ENST00000641336 MUC17Q685J3 4493 aa2.04□□□□□ -2.08
SAMMSON-213ENST00000641336 FSIP2Q5CZC0 6907 aa2.01□□□□□ -2.09
SAMMSON-213ENST00000641336 KRTAP6-3Q3LI67 103 aa2.01□□□□□ -2.09
SAMMSON-213ENST00000641336 LCE3EQ5T5B0 92 aa2□□□□□ -2.09
SAMMSON-213ENST00000641336 FAT4Q6V0I7 4981 aa1.99□□□□□ -2.09
SAMMSON-213ENST00000641336 TNP1P09430 55 aa1.99□□□□□ -2.09
SAMMSON-213ENST00000641336 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
SAMMSON-213ENST00000641336 KRTAP4-1Q9BYQ7 146 aa1.98□□□□□ -2.09
SAMMSON-213ENST00000641336 MUC2Q02817 5179 aa1.98□□□□□ -2.09
SAMMSON-213ENST00000641336 KRTAP12-4P60329 112 aa1.96□□□□□ -2.09
SAMMSON-213ENST00000641336 KRTAP19-2Q3LHN2 52 aa1.93□□□□□ -2.1
SAMMSON-213ENST00000641336 FLGP20930 4061 aaPredicted RBP1.9□□□□□ -2.1
SAMMSON-213ENST00000641336 CRCT1Q9UGL9 99 aa1.89□□□□□ -2.11
SAMMSON-213ENST00000641336 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
SAMMSON-213ENST00000641336 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
SAMMSON-213ENST00000641336 M0R2T5 61 aa1.81□□□□□ -2.12
SAMMSON-213ENST00000641336 MT1HP80294 61 aa1.8□□□□□ -2.12
SAMMSON-213ENST00000641336 SYNE2Q8WXH0 6885 aaKnown RBP1.8□□□□□ -2.12
SAMMSON-213ENST00000641336 KRTAP2-3P0C7H8 128 aa1.79□□□□□ -2.12
SAMMSON-213ENST00000641336 KRTAP2-4Q9BYR9 128 aa1.79□□□□□ -2.12
SAMMSON-213ENST00000641336 KRTAP2-1Q9BYU5 128 aa1.79□□□□□ -2.12
SAMMSON-213ENST00000641336 SPRR2GQ9BYE4 73 aa1.78□□□□□ -2.12
SAMMSON-213ENST00000641336 MT2AP02795 61 aa1.76□□□□□ -2.13
SAMMSON-213ENST00000641336 MT1FP04733 61 aa1.76□□□□□ -2.13
SAMMSON-213ENST00000641336 MACF1Q9UPN3 7388 aaKnown RBP1.75□□□□□ -2.13
SAMMSON-213ENST00000641336 KRTAP12-3P60328 96 aa1.75□□□□□ -2.13
SAMMSON-213ENST00000641336 KRTAP8-1Q8IUC2 63 aa1.72□□□□□ -2.13
SAMMSON-213ENST00000641336 KRTAP19-8Q3LI54 63 aa1.71□□□□□ -2.14
SAMMSON-213ENST00000641336 USH2AO75445 5202 aa1.7□□□□□ -2.14
SAMMSON-213ENST00000641336 SSPOA2VEC9 5147 aa1.69□□□□□ -2.14
SAMMSON-213ENST00000641336 NEBP20929 6669 aa1.69□□□□□ -2.14
SAMMSON-213ENST00000641336 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
SAMMSON-213ENST00000641336 MT1BP07438 61 aa1.69□□□□□ -2.14
SAMMSON-213ENST00000641336 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
SAMMSON-213ENST00000641336 MT1XP80297 61 aa1.66□□□□□ -2.14
SAMMSON-213ENST00000641336 LCE3DQ9BYE3 92 aa1.65□□□□□ -2.15
SAMMSON-213ENST00000641336 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.15
SAMMSON-213ENST00000641336 KRTAP20-1Q3LI63 56 aa1.58□□□□□ -2.16
SAMMSON-213ENST00000641336 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
SAMMSON-213ENST00000641336 KRTAP19-5Q3LI72 72 aa1.56□□□□□ -2.16
SAMMSON-213ENST00000641336 MDN1Q9NU22 5596 aa1.55□□□□□ -2.16
SAMMSON-213ENST00000641336 PRM1P04553 51 aa1.52□□□□□ -2.17
SAMMSON-213ENST00000641336 KMT2DO14686 5537 aa1.51□□□□□ -2.17
SAMMSON-213ENST00000641336 KRTAP19-6Q3LI70 58 aa1.5□□□□□ -2.17
SAMMSON-213ENST00000641336 KRTAP19-7Q3SYF9 63 aa1.48□□□□□ -2.17
SAMMSON-213ENST00000641336 MT1EP04732 61 aa1.45□□□□□ -2.18
SAMMSON-213ENST00000641336 MT1LQ93083 61 aa1.45□□□□□ -2.18
SAMMSON-213ENST00000641336 MT1AP04731 61 aa1.4□□□□□ -2.18
SAMMSON-213ENST00000641336 SPRR2EP22531 72 aa1.4□□□□□ -2.18
SAMMSON-213ENST00000641336 SPRR2BP35325 72 aa1.4□□□□□ -2.18
SAMMSON-213ENST00000641336 SPRR2AP35326 72 aa1.4□□□□□ -2.18
SAMMSON-213ENST00000641336 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.19
SAMMSON-213ENST00000641336 SPRR2FQ96RM1 72 aa1.38□□□□□ -2.19
SAMMSON-213ENST00000641336 SPRR2DP22532 72 aa1.36□□□□□ -2.19
SAMMSON-213ENST00000641336 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
SAMMSON-213ENST00000641336 MT1MQ8N339 61 aa1.36□□□□□ -2.19
SAMMSON-213ENST00000641336 MT1GP13640 62 aa1.35□□□□□ -2.19
SAMMSON-213ENST00000641336 AHNAK2Q8IVF2 5795 aa1.32□□□□□ -2.2
SAMMSON-213ENST00000641336 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
SAMMSON-213ENST00000641336 MT4P47944 62 aa1.23□□□□□ -2.21
SAMMSON-213ENST00000641336 KRTAP6-1Q3LI64 71 aa1.22□□□□□ -2.21
SAMMSON-213ENST00000641336 SYNE1Q8NF91 8797 aaKnown RBP1.22□□□□□ -2.21
SAMMSON-213ENST00000641336 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
SAMMSON-213ENST00000641336 AHNAKQ09666 5890 aaKnown RBP1.19□□□□□ -2.22
SAMMSON-213ENST00000641336 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
SAMMSON-213ENST00000641336 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
SAMMSON-213ENST00000641336 MUC5BQ9HC84 5762 aaPredicted RBP1.1□□□□□ -2.23
SAMMSON-213ENST00000641336 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
SAMMSON-213ENST00000641336 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
SAMMSON-213ENST00000641336 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 147.6 ms