RNA–Protein interactions for RNA: ENST00000641012.1

MACF1-234, Transcript of microtubule-actin crosslinking factor 1, humanhuman

BASIC

Gene MACF1, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-234ENST00000641012 MT1EP04732 61 aa3.73□□□□□ -1.81
MACF1-234ENST00000641012 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
MACF1-234ENST00000641012 MT1LQ93083 61 aa3.7□□□□□ -1.82
MACF1-234ENST00000641012 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
MACF1-234ENST00000641012 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
MACF1-234ENST00000641012 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
MACF1-234ENST00000641012 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
MACF1-234ENST00000641012 USH2AO75445 5202 aa3.63□□□□□ -1.83
MACF1-234ENST00000641012 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
MACF1-234ENST00000641012 MT1MQ8N339 61 aa3.6□□□□□ -1.83
MACF1-234ENST00000641012 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
MACF1-234ENST00000641012 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
MACF1-234ENST00000641012 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
MACF1-234ENST00000641012 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
MACF1-234ENST00000641012 KMT2DO14686 5537 aa3.52□□□□□ -1.85
MACF1-234ENST00000641012 MT4P47944 62 aa3.51□□□□□ -1.85
MACF1-234ENST00000641012 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
MACF1-234ENST00000641012 FCGBPQ9Y6R7 5405 aaPredicted RBP3.49□□□□□ -1.85
MACF1-234ENST00000641012 LOC100996750A0A140TA64 210 aa3.47□□□□□ -1.85
MACF1-234ENST00000641012 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
MACF1-234ENST00000641012 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
MACF1-234ENST00000641012 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.86
MACF1-234ENST00000641012 SSPOA2VEC9 5147 aa3.39□□□□□ -1.87
MACF1-234ENST00000641012 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
MACF1-234ENST00000641012 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
MACF1-234ENST00000641012 MT3P25713 68 aa3.32□□□□□ -1.88
MACF1-234ENST00000641012 KRTAP2-3P0C7H8 128 aa3.31□□□□□ -1.88
MACF1-234ENST00000641012 KRTAP2-4Q9BYR9 128 aa3.31□□□□□ -1.88
MACF1-234ENST00000641012 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
MACF1-234ENST00000641012 MUC12Q9UKN1 5478 aa3.3□□□□□ -1.88
MACF1-234ENST00000641012 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
MACF1-234ENST00000641012 MT1AP04731 61 aa3.25□□□□□ -1.89
MACF1-234ENST00000641012 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
MACF1-234ENST00000641012 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
MACF1-234ENST00000641012 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
MACF1-234ENST00000641012 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
MACF1-234ENST00000641012 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
MACF1-234ENST00000641012 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
MACF1-234ENST00000641012 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
MACF1-234ENST00000641012 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
MACF1-234ENST00000641012 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
MACF1-234ENST00000641012 NEBP20929 6669 aa3.11□□□□□ -1.91
MACF1-234ENST00000641012 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
MACF1-234ENST00000641012 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
MACF1-234ENST00000641012 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
MACF1-234ENST00000641012 PRM1P04553 51 aa2.9□□□□□ -1.95
MACF1-234ENST00000641012 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
MACF1-234ENST00000641012 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
MACF1-234ENST00000641012 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
MACF1-234ENST00000641012 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
MACF1-234ENST00000641012 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
MACF1-234ENST00000641012 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
MACF1-234ENST00000641012 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
MACF1-234ENST00000641012 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
MACF1-234ENST00000641012 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
MACF1-234ENST00000641012 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
MACF1-234ENST00000641012 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
MACF1-234ENST00000641012 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
MACF1-234ENST00000641012 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
MACF1-234ENST00000641012 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
MACF1-234ENST00000641012 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
MACF1-234ENST00000641012 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.04
MACF1-234ENST00000641012 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.04
MACF1-234ENST00000641012 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
MACF1-234ENST00000641012 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
MACF1-234ENST00000641012 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
MACF1-234ENST00000641012 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
MACF1-234ENST00000641012 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
MACF1-234ENST00000641012 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
MACF1-234ENST00000641012 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
MACF1-234ENST00000641012 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
MACF1-234ENST00000641012 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
MACF1-234ENST00000641012 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
MACF1-234ENST00000641012 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
MACF1-234ENST00000641012 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
MACF1-234ENST00000641012 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
MACF1-234ENST00000641012 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 482.9 ms