RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 LPAP08519 4548 aa2.13□□□□□ -2.07
RTTN-220ENST00000640654 BIRC6Q9NR09 4857 aa2.11□□□□□ -2.07
RTTN-220ENST00000640654 EPPK1P58107 5090 aaKnown RBP2.1□□□□□ -2.07
RTTN-220ENST00000640654 MUC2Q02817 5179 aa2.08□□□□□ -2.08
RTTN-220ENST00000640654 HERC1Q15751 4861 aa2.07□□□□□ -2.08
RTTN-220ENST00000640654 CAMK2N1Q7Z7J9 78 aa2.06□□□□□ -2.08
RTTN-220ENST00000640654 PLAC4Q8WY50 150 aa2.04□□□□□ -2.08
RTTN-220ENST00000640654 ABCA13Q86UQ4 5058 aa2.03□□□□□ -2.08
RTTN-220ENST00000640654 HERC2O95714 4834 aa2.02□□□□□ -2.09
RTTN-220ENST00000640654 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
RTTN-220ENST00000640654 TNP1P09430 55 aa1.99□□□□□ -2.09
RTTN-220ENST00000640654 FLGP20930 4061 aaPredicted RBP1.98□□□□□ -2.09
RTTN-220ENST00000640654 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
RTTN-220ENST00000640654 KRTAP10-10P60014 251 aa1.97□□□□□ -2.09
RTTN-220ENST00000640654 SPRR2GQ9BYE4 73 aa1.96□□□□□ -2.1
RTTN-220ENST00000640654 M0R2T5 61 aa1.94□□□□□ -2.1
RTTN-220ENST00000640654 MT1HP80294 61 aa1.94□□□□□ -2.1
RTTN-220ENST00000640654 MT2AP02795 61 aa1.93□□□□□ -2.1
RTTN-220ENST00000640654 LUZP6Q538Z0 58 aa1.93□□□□□ -2.1
RTTN-220ENST00000640654 MT1FP04733 61 aa1.92□□□□□ -2.1
RTTN-220ENST00000640654 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
RTTN-220ENST00000640654 SPRR5A0A1B0GTR4 108 aa1.91□□□□□ -2.1
RTTN-220ENST00000640654 HMCN2Q8NDA2 5059 aa1.9□□□□□ -2.1
RTTN-220ENST00000640654 KRTAP19-8Q3LI54 63 aa1.89□□□□□ -2.11
RTTN-220ENST00000640654 MT1BP07438 61 aa1.87□□□□□ -2.11
RTTN-220ENST00000640654 MT1XP80297 61 aa1.84□□□□□ -2.11
RTTN-220ENST00000640654 KRTAP8-1Q8IUC2 63 aa1.84□□□□□ -2.11
RTTN-220ENST00000640654 RNF213Q63HN8 5207 aa1.83□□□□□ -2.12
RTTN-220ENST00000640654 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
RTTN-220ENST00000640654 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
RTTN-220ENST00000640654 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
RTTN-220ENST00000640654 PRO2289Q9P1D8 64 aa1.75□□□□□ -2.13
RTTN-220ENST00000640654 FSIP2Q5CZC0 6907 aa1.73□□□□□ -2.13
RTTN-220ENST00000640654 KRTAP19-5Q3LI72 72 aa1.73□□□□□ -2.13
RTTN-220ENST00000640654 NEBP20929 6669 aa1.73□□□□□ -2.13
RTTN-220ENST00000640654 INE1O15225 51 aa1.68□□□□□ -2.14
RTTN-220ENST00000640654 SYNE2Q8WXH0 6885 aaKnown RBP1.67□□□□□ -2.14
RTTN-220ENST00000640654 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
RTTN-220ENST00000640654 MACF1Q9UPN3 7388 aaKnown RBP1.64□□□□□ -2.15
RTTN-220ENST00000640654 KRTAP19-7Q3SYF9 63 aa1.64□□□□□ -2.15
RTTN-220ENST00000640654 MT1LQ93083 61 aa1.61□□□□□ -2.15
RTTN-220ENST00000640654 MT1EP04732 61 aa1.6□□□□□ -2.15
RTTN-220ENST00000640654 SSPOA2VEC9 5147 aa1.58□□□□□ -2.16
RTTN-220ENST00000640654 USH2AO75445 5202 aa1.58□□□□□ -2.16
RTTN-220ENST00000640654 KRTAP2-3P0C7H8 128 aa1.58□□□□□ -2.16
RTTN-220ENST00000640654 KRTAP2-4Q9BYR9 128 aa1.58□□□□□ -2.16
RTTN-220ENST00000640654 KRTAP2-1Q9BYU5 128 aa1.58□□□□□ -2.16
RTTN-220ENST00000640654 KRTAP19-6Q3LI70 58 aa1.57□□□□□ -2.16
RTTN-220ENST00000640654 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
RTTN-220ENST00000640654 FCGBPQ9Y6R7 5405 aaPredicted RBP1.54□□□□□ -2.16
RTTN-220ENST00000640654 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
RTTN-220ENST00000640654 KMT2DO14686 5537 aa1.52□□□□□ -2.17
RTTN-220ENST00000640654 KRTAP20-1Q3LI63 56 aa1.5□□□□□ -2.17
RTTN-220ENST00000640654 MT1MQ8N339 61 aa1.5□□□□□ -2.17
RTTN-220ENST00000640654 MT1GP13640 62 aa1.49□□□□□ -2.17
RTTN-220ENST00000640654 KRTAP19-3Q7Z4W3 81 aa1.49□□□□□ -2.17
RTTN-220ENST00000640654 MUC5BQ9HC84 5762 aaPredicted RBP1.46□□□□□ -2.18
RTTN-220ENST00000640654 SPRR2FQ96RM1 72 aa1.41□□□□□ -2.18
RTTN-220ENST00000640654 KRTAP6-3Q3LI67 103 aa1.39□□□□□ -2.19
RTTN-220ENST00000640654 MT1AP04731 61 aa1.36□□□□□ -2.19
RTTN-220ENST00000640654 DSTQ03001 7570 aaKnown RBP1.36□□□□□ -2.19
RTTN-220ENST00000640654 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
RTTN-220ENST00000640654 MUC12Q9UKN1 5478 aa1.36□□□□□ -2.19
RTTN-220ENST00000640654 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
RTTN-220ENST00000640654 SPRR2EP22531 72 aa1.31□□□□□ -2.2
RTTN-220ENST00000640654 SPRR2BP35325 72 aa1.31□□□□□ -2.2
RTTN-220ENST00000640654 SPRR2AP35326 72 aa1.31□□□□□ -2.2
RTTN-220ENST00000640654 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
RTTN-220ENST00000640654 SPRR2DP22532 72 aa1.25□□□□□ -2.21
RTTN-220ENST00000640654 PRM1P04553 51 aa1.24□□□□□ -2.21
RTTN-220ENST00000640654 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
RTTN-220ENST00000640654 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
RTTN-220ENST00000640654 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
RTTN-220ENST00000640654 MT4P47944 62 aa1.09□□□□□ -2.23
RTTN-220ENST00000640654 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
RTTN-220ENST00000640654 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
RTTN-220ENST00000640654 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
RTTN-220ENST00000640654 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 46 ms