RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 MT1LQ93083 61 aa4.85□□□□□ -1.63
GFAP-237ENST00000640552 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
GFAP-237ENST00000640552 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
GFAP-237ENST00000640552 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
GFAP-237ENST00000640552 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
GFAP-237ENST00000640552 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
GFAP-237ENST00000640552 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
GFAP-237ENST00000640552 SYNE2Q8WXH0 6885 aaKnown RBP4.75□□□□□ -1.65
GFAP-237ENST00000640552 MT1GP13640 62 aa4.75□□□□□ -1.65
GFAP-237ENST00000640552 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
GFAP-237ENST00000640552 MDN1Q9NU22 5596 aa4.61□□□□□ -1.67
GFAP-237ENST00000640552 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
GFAP-237ENST00000640552 MT1MQ8N339 61 aa4.58□□□□□ -1.68
GFAP-237ENST00000640552 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
GFAP-237ENST00000640552 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
GFAP-237ENST00000640552 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
GFAP-237ENST00000640552 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
GFAP-237ENST00000640552 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
GFAP-237ENST00000640552 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
GFAP-237ENST00000640552 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
GFAP-237ENST00000640552 SPRR2EP22531 72 aa4.35□□□□□ -1.71
GFAP-237ENST00000640552 SPRR2BP35325 72 aa4.35□□□□□ -1.71
GFAP-237ENST00000640552 SPRR2AP35326 72 aa4.35□□□□□ -1.71
GFAP-237ENST00000640552 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
GFAP-237ENST00000640552 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
GFAP-237ENST00000640552 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
GFAP-237ENST00000640552 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
GFAP-237ENST00000640552 SPRR2DP22532 72 aa4.14□□□□□ -1.75
GFAP-237ENST00000640552 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
GFAP-237ENST00000640552 MT1AP04731 61 aa4.03□□□□□ -1.76
GFAP-237ENST00000640552 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.02□□□□□ -1.77
GFAP-237ENST00000640552 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
GFAP-237ENST00000640552 KRTAP9-6A0A140TA67 174 aa3.94□□□□□ -1.78
GFAP-237ENST00000640552 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
GFAP-237ENST00000640552 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
GFAP-237ENST00000640552 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
GFAP-237ENST00000640552 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
GFAP-237ENST00000640552 MT4P47944 62 aa3.82□□□□□ -1.8
GFAP-237ENST00000640552 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
GFAP-237ENST00000640552 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
GFAP-237ENST00000640552 PRM1P04553 51 aa3.73□□□□□ -1.81
GFAP-237ENST00000640552 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
GFAP-237ENST00000640552 MT3P25713 68 aa3.72□□□□□ -1.81
GFAP-237ENST00000640552 NEBP20929 6669 aa3.68□□□□□ -1.82
GFAP-237ENST00000640552 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
GFAP-237ENST00000640552 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
GFAP-237ENST00000640552 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
GFAP-237ENST00000640552 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
GFAP-237ENST00000640552 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
GFAP-237ENST00000640552 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
GFAP-237ENST00000640552 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
GFAP-237ENST00000640552 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
GFAP-237ENST00000640552 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
GFAP-237ENST00000640552 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
GFAP-237ENST00000640552 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
GFAP-237ENST00000640552 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
GFAP-237ENST00000640552 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
GFAP-237ENST00000640552 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
GFAP-237ENST00000640552 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
GFAP-237ENST00000640552 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
GFAP-237ENST00000640552 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
GFAP-237ENST00000640552 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
GFAP-237ENST00000640552 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
GFAP-237ENST00000640552 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
GFAP-237ENST00000640552 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
GFAP-237ENST00000640552 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
GFAP-237ENST00000640552 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
GFAP-237ENST00000640552 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
GFAP-237ENST00000640552 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
GFAP-237ENST00000640552 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
GFAP-237ENST00000640552 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
GFAP-237ENST00000640552 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
GFAP-237ENST00000640552 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
GFAP-237ENST00000640552 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
GFAP-237ENST00000640552 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
GFAP-237ENST00000640552 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
GFAP-237ENST00000640552 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
GFAP-237ENST00000640552 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 76.1 ms