RNA–Protein interactions for RNA: ENST00000640481.1

NECAP1-226, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,216 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-226ENST00000640481 MT1LQ93083 61 aa2.38□□□□□ -2.03
NECAP1-226ENST00000640481 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
NECAP1-226ENST00000640481 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.03
NECAP1-226ENST00000640481 KRTAP19-4Q3LI73 84 aa2.33□□□□□ -2.04
NECAP1-226ENST00000640481 KRTAP9-2Q9BYQ4 174 aa2.33□□□□□ -2.04
NECAP1-226ENST00000640481 KRTAP9-6A0A140TA67 174 aa2.32□□□□□ -2.04
NECAP1-226ENST00000640481 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
NECAP1-226ENST00000640481 SYNE2Q8WXH0 6885 aaKnown RBP2.28□□□□□ -2.04
NECAP1-226ENST00000640481 KRTAP19-3Q7Z4W3 81 aa2.28□□□□□ -2.04
NECAP1-226ENST00000640481 SPRR2FQ96RM1 72 aa2.28□□□□□ -2.04
NECAP1-226ENST00000640481 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
NECAP1-226ENST00000640481 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
NECAP1-226ENST00000640481 CRCT1Q9UGL9 99 aa2.27□□□□□ -2.05
NECAP1-226ENST00000640481 MT1GP13640 62 aa2.27□□□□□ -2.05
NECAP1-226ENST00000640481 LCE5AQ5TCM9 118 aa2.26□□□□□ -2.05
NECAP1-226ENST00000640481 MT1MQ8N339 61 aa2.26□□□□□ -2.05
NECAP1-226ENST00000640481 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
NECAP1-226ENST00000640481 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
NECAP1-226ENST00000640481 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
NECAP1-226ENST00000640481 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
NECAP1-226ENST00000640481 KRTAP5-9P26371 169 aa2.17□□□□□ -2.06
NECAP1-226ENST00000640481 LCE1AQ5T7P2 110 aa2.14□□□□□ -2.07
NECAP1-226ENST00000640481 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.12□□□□□ -2.07
NECAP1-226ENST00000640481 SPRR2EP22531 72 aa2.12□□□□□ -2.07
NECAP1-226ENST00000640481 SPRR2BP35325 72 aa2.12□□□□□ -2.07
NECAP1-226ENST00000640481 SPRR2AP35326 72 aa2.12□□□□□ -2.07
NECAP1-226ENST00000640481 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
NECAP1-226ENST00000640481 KRTAP9-4Q9BYQ2 154 aa2.09□□□□□ -2.07
NECAP1-226ENST00000640481 LCE3BQ5TA77 95 aa2.08□□□□□ -2.08
NECAP1-226ENST00000640481 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
NECAP1-226ENST00000640481 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
NECAP1-226ENST00000640481 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
NECAP1-226ENST00000640481 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
NECAP1-226ENST00000640481 SPRR2DP22532 72 aa2.02□□□□□ -2.09
NECAP1-226ENST00000640481 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
NECAP1-226ENST00000640481 KRTAP9-9Q9BYP9 154 aa2.02□□□□□ -2.09
NECAP1-226ENST00000640481 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
NECAP1-226ENST00000640481 MT1AP04731 61 aa2□□□□□ -2.09
NECAP1-226ENST00000640481 KRTAP9-7A8MTY7 169 aa1.99□□□□□ -2.09
NECAP1-226ENST00000640481 LCE4AQ5TA78 99 aa1.98□□□□□ -2.09
NECAP1-226ENST00000640481 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
NECAP1-226ENST00000640481 LCE1DQ5T752 114 aa1.97□□□□□ -2.09
NECAP1-226ENST00000640481 KRTAP4-9Q9BYQ8 210 aa1.95□□□□□ -2.1
NECAP1-226ENST00000640481 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
NECAP1-226ENST00000640481 NEBP20929 6669 aa1.93□□□□□ -2.1
NECAP1-226ENST00000640481 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
NECAP1-226ENST00000640481 KRTAP4-2Q9BYR5 136 aa1.91□□□□□ -2.1
NECAP1-226ENST00000640481 OBSCNQ5VST9 7968 aa1.89□□□□□ -2.11
NECAP1-226ENST00000640481 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
NECAP1-226ENST00000640481 MT3P25713 68 aa1.85□□□□□ -2.11
NECAP1-226ENST00000640481 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.12
NECAP1-226ENST00000640481 KRTAP5-4Q6L8H1 288 aa1.84□□□□□ -2.12
NECAP1-226ENST00000640481 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
NECAP1-226ENST00000640481 KRTAP4-11Q9BYQ6 195 aa1.81□□□□□ -2.12
NECAP1-226ENST00000640481 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
NECAP1-226ENST00000640481 MT4P47944 62 aa1.79□□□□□ -2.12
NECAP1-226ENST00000640481 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
NECAP1-226ENST00000640481 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
NECAP1-226ENST00000640481 PRM1P04553 51 aa1.73□□□□□ -2.13
NECAP1-226ENST00000640481 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
NECAP1-226ENST00000640481 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
NECAP1-226ENST00000640481 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
NECAP1-226ENST00000640481 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
NECAP1-226ENST00000640481 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
NECAP1-226ENST00000640481 KRTAP5-1Q6L8H4 278 aa1.46□□□□□ -2.18
NECAP1-226ENST00000640481 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
NECAP1-226ENST00000640481 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
NECAP1-226ENST00000640481 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
NECAP1-226ENST00000640481 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
NECAP1-226ENST00000640481 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
NECAP1-226ENST00000640481 KRTAP5-8O75690 187 aa1.41□□□□□ -2.18
NECAP1-226ENST00000640481 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.4□□□□□ -2.19
NECAP1-226ENST00000640481 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
NECAP1-226ENST00000640481 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
NECAP1-226ENST00000640481 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
NECAP1-226ENST00000640481 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
NECAP1-226ENST00000640481 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
NECAP1-226ENST00000640481 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 150.2 ms