RNA–Protein interactions for RNA: ENST00000639601.1

KCNMA1-266, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 11,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-266ENST00000639601 MT1MQ8N339 61 aa2.36□□□□□ -2.03
KCNMA1-266ENST00000639601 SPRR2EP22531 72 aa2.36□□□□□ -2.03
KCNMA1-266ENST00000639601 SPRR2BP35325 72 aa2.36□□□□□ -2.03
KCNMA1-266ENST00000639601 SPRR2AP35326 72 aa2.36□□□□□ -2.03
KCNMA1-266ENST00000639601 KRTAP2-3P0C7H8 128 aa2.35□□□□□ -2.03
KCNMA1-266ENST00000639601 KRTAP2-4Q9BYR9 128 aa2.35□□□□□ -2.03
KCNMA1-266ENST00000639601 KRTAP2-1Q9BYU5 128 aa2.35□□□□□ -2.03
KCNMA1-266ENST00000639601 LPAP08519 4548 aa2.34□□□□□ -2.04
KCNMA1-266ENST00000639601 KRTAP19-7Q3SYF9 63 aa2.33□□□□□ -2.04
KCNMA1-266ENST00000639601 LCE2DQ5TA82 110 aaPredicted RBP2.32□□□□□ -2.04
KCNMA1-266ENST00000639601 SPRR2DP22532 72 aa2.29□□□□□ -2.04
KCNMA1-266ENST00000639601 LOC100996750A0A140TA64 210 aa2.28□□□□□ -2.04
KCNMA1-266ENST00000639601 MUC12Q9UKN1 5478 aa2.26□□□□□ -2.05
KCNMA1-266ENST00000639601 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
KCNMA1-266ENST00000639601 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
KCNMA1-266ENST00000639601 KRTAP19-6Q3LI70 58 aa2.25□□□□□ -2.05
KCNMA1-266ENST00000639601 PRM1P04553 51 aa2.23□□□□□ -2.05
KCNMA1-266ENST00000639601 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
KCNMA1-266ENST00000639601 MT1AP04731 61 aa2.2□□□□□ -2.06
KCNMA1-266ENST00000639601 LCE2AQ5TA79 106 aaPredicted RBP2.19□□□□□ -2.06
KCNMA1-266ENST00000639601 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
KCNMA1-266ENST00000639601 KRTAP4-9Q9BYQ8 210 aa2.15□□□□□ -2.07
KCNMA1-266ENST00000639601 KMT2DO14686 5537 aa2.13□□□□□ -2.07
KCNMA1-266ENST00000639601 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
KCNMA1-266ENST00000639601 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
KCNMA1-266ENST00000639601 SSPOA2VEC9 5147 aa2.09□□□□□ -2.07
KCNMA1-266ENST00000639601 DSTQ03001 7570 aaKnown RBP2.09□□□□□ -2.07
KCNMA1-266ENST00000639601 LCE5AQ5TCM9 118 aa2.08□□□□□ -2.08
KCNMA1-266ENST00000639601 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
KCNMA1-266ENST00000639601 SYNE2Q8WXH0 6885 aaKnown RBP2.06□□□□□ -2.08
KCNMA1-266ENST00000639601 MT4P47944 62 aa2.04□□□□□ -2.08
KCNMA1-266ENST00000639601 LCE1DQ5T752 114 aa2.03□□□□□ -2.08
KCNMA1-266ENST00000639601 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
KCNMA1-266ENST00000639601 LCE1AQ5T7P2 110 aa2□□□□□ -2.09
KCNMA1-266ENST00000639601 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
KCNMA1-266ENST00000639601 KRTAP9-2Q9BYQ4 174 aa2□□□□□ -2.09
KCNMA1-266ENST00000639601 KRTAP9-7A8MTY7 169 aa1.99□□□□□ -2.09
KCNMA1-266ENST00000639601 MACF1Q9UPN3 7388 aaKnown RBP1.99□□□□□ -2.09
KCNMA1-266ENST00000639601 NEBP20929 6669 aa1.96□□□□□ -2.1
KCNMA1-266ENST00000639601 KRTAP9-4Q9BYQ2 154 aa1.94□□□□□ -2.1
KCNMA1-266ENST00000639601 LCE4AQ5TA78 99 aa1.88□□□□□ -2.11
KCNMA1-266ENST00000639601 KRTAP2-2Q9BYT5 123 aa1.86□□□□□ -2.11
KCNMA1-266ENST00000639601 KRTAP6-3Q3LI67 103 aa1.86□□□□□ -2.11
KCNMA1-266ENST00000639601 KRTAP9-6A0A140TA67 174 aa1.81□□□□□ -2.12
KCNMA1-266ENST00000639601 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.78□□□□□ -2.12
KCNMA1-266ENST00000639601 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
KCNMA1-266ENST00000639601 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
KCNMA1-266ENST00000639601 KRTAP20-1Q3LI63 56 aa1.74□□□□□ -2.13
KCNMA1-266ENST00000639601 LCE1FQ5T754 118 aa1.74□□□□□ -2.13
KCNMA1-266ENST00000639601 KRTAP5-9P26371 169 aa1.74□□□□□ -2.13
KCNMA1-266ENST00000639601 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
KCNMA1-266ENST00000639601 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
KCNMA1-266ENST00000639601 LCE1EQ5T753 118 aa1.68□□□□□ -2.14
KCNMA1-266ENST00000639601 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
KCNMA1-266ENST00000639601 KRTAP4-11Q9BYQ6 195 aa1.62□□□□□ -2.15
KCNMA1-266ENST00000639601 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
KCNMA1-266ENST00000639601 KRTAP4-6Q9BYQ5 205 aa1.61□□□□□ -2.15
KCNMA1-266ENST00000639601 KRTAP20-2Q3LI61 65 aa1.61□□□□□ -2.15
KCNMA1-266ENST00000639601 KRTAP9-9Q9BYP9 154 aa1.57□□□□□ -2.16
KCNMA1-266ENST00000639601 KRTAP5-4Q6L8H1 288 aa1.49□□□□□ -2.17
KCNMA1-266ENST00000639601 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
KCNMA1-266ENST00000639601 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
KCNMA1-266ENST00000639601 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
KCNMA1-266ENST00000639601 KRTAP4-12Q9BQ66 201 aa1.37□□□□□ -2.19
KCNMA1-266ENST00000639601 KRTAP4-2Q9BYR5 136 aa1.37□□□□□ -2.19
KCNMA1-266ENST00000639601 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
KCNMA1-266ENST00000639601 KRTAP5-3Q6L8H2 238 aa1.31□□□□□ -2.2
KCNMA1-266ENST00000639601 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
KCNMA1-266ENST00000639601 KRTAP5-8O75690 187 aa1.15□□□□□ -2.23
KCNMA1-266ENST00000639601 KRTAP5-1Q6L8H4 278 aa1.13□□□□□ -2.23
KCNMA1-266ENST00000639601 KRTAP5-11Q6L8G4 156 aa1.13□□□□□ -2.23
KCNMA1-266ENST00000639601 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
KCNMA1-266ENST00000639601 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.07□□□□□ -2.24
KCNMA1-266ENST00000639601 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
KCNMA1-266ENST00000639601 KRTAP5-7Q6L8G8 165 aa0.98□□□□□ -2.25
KCNMA1-266ENST00000639601 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
KCNMA1-266ENST00000639601 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 153.5 ms