RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 MT1EP04732 61 aa3.39□□□□□ -1.87
CACNA1A-248ENST00000637774 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
CACNA1A-248ENST00000637774 MT1LQ93083 61 aa3.37□□□□□ -1.87
CACNA1A-248ENST00000637774 KRTAP9-2Q9BYQ4 174 aa3.36□□□□□ -1.87
CACNA1A-248ENST00000637774 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
CACNA1A-248ENST00000637774 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
CACNA1A-248ENST00000637774 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
CACNA1A-248ENST00000637774 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
CACNA1A-248ENST00000637774 MT1GP13640 62 aa3.28□□□□□ -1.89
CACNA1A-248ENST00000637774 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
CACNA1A-248ENST00000637774 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
CACNA1A-248ENST00000637774 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
CACNA1A-248ENST00000637774 MT1MQ8N339 61 aa3.2□□□□□ -1.9
CACNA1A-248ENST00000637774 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
CACNA1A-248ENST00000637774 SPRR2EP22531 72 aa3.13□□□□□ -1.91
CACNA1A-248ENST00000637774 SPRR2BP35325 72 aa3.13□□□□□ -1.91
CACNA1A-248ENST00000637774 SPRR2AP35326 72 aa3.13□□□□□ -1.91
CACNA1A-248ENST00000637774 KRTAP19-4Q3LI73 84 aa3.13□□□□□ -1.91
CACNA1A-248ENST00000637774 LCE5AQ5TCM9 118 aa3.09□□□□□ -1.92
CACNA1A-248ENST00000637774 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
CACNA1A-248ENST00000637774 LCE1AQ5T7P2 110 aa3.03□□□□□ -1.93
CACNA1A-248ENST00000637774 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
CACNA1A-248ENST00000637774 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
CACNA1A-248ENST00000637774 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
CACNA1A-248ENST00000637774 SPRR2DP22532 72 aa2.99□□□□□ -1.93
CACNA1A-248ENST00000637774 KRTAP9-6A0A140TA67 174 aa2.98□□□□□ -1.93
CACNA1A-248ENST00000637774 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
CACNA1A-248ENST00000637774 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
CACNA1A-248ENST00000637774 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
CACNA1A-248ENST00000637774 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
CACNA1A-248ENST00000637774 KRTAP6-3Q3LI67 103 aa2.86□□□□□ -1.95
CACNA1A-248ENST00000637774 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
CACNA1A-248ENST00000637774 MT1AP04731 61 aa2.81□□□□□ -1.96
CACNA1A-248ENST00000637774 KRTAP9-7A8MTY7 169 aa2.81□□□□□ -1.96
CACNA1A-248ENST00000637774 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
CACNA1A-248ENST00000637774 MT4P47944 62 aa2.72□□□□□ -1.97
CACNA1A-248ENST00000637774 KRTAP4-6Q9BYQ5 205 aa2.71□□□□□ -1.98
CACNA1A-248ENST00000637774 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
CACNA1A-248ENST00000637774 NEBP20929 6669 aa2.68□□□□□ -1.98
CACNA1A-248ENST00000637774 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
CACNA1A-248ENST00000637774 KRTAP9-4Q9BYQ2 154 aa2.66□□□□□ -1.98
CACNA1A-248ENST00000637774 KRTAP2-2Q9BYT5 123 aa2.66□□□□□ -1.98
CACNA1A-248ENST00000637774 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.98
CACNA1A-248ENST00000637774 MT3P25713 68 aa2.62□□□□□ -1.99
CACNA1A-248ENST00000637774 PRM1P04553 51 aa2.54□□□□□ -2
CACNA1A-248ENST00000637774 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
CACNA1A-248ENST00000637774 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
CACNA1A-248ENST00000637774 LCE1DQ5T752 114 aa2.47□□□□□ -2.01
CACNA1A-248ENST00000637774 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
CACNA1A-248ENST00000637774 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
CACNA1A-248ENST00000637774 LCE4AQ5TA78 99 aa2.46□□□□□ -2.02
CACNA1A-248ENST00000637774 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
CACNA1A-248ENST00000637774 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
CACNA1A-248ENST00000637774 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
CACNA1A-248ENST00000637774 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
CACNA1A-248ENST00000637774 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
CACNA1A-248ENST00000637774 KRTAP9-9Q9BYP9 154 aa2.26□□□□□ -2.05
CACNA1A-248ENST00000637774 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
CACNA1A-248ENST00000637774 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
CACNA1A-248ENST00000637774 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
CACNA1A-248ENST00000637774 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
CACNA1A-248ENST00000637774 KRTAP4-11Q9BYQ6 195 aa2.11□□□□□ -2.07
CACNA1A-248ENST00000637774 KRTAP4-2Q9BYR5 136 aa2.06□□□□□ -2.08
CACNA1A-248ENST00000637774 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
CACNA1A-248ENST00000637774 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
CACNA1A-248ENST00000637774 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
CACNA1A-248ENST00000637774 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
CACNA1A-248ENST00000637774 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
CACNA1A-248ENST00000637774 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
CACNA1A-248ENST00000637774 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
CACNA1A-248ENST00000637774 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
CACNA1A-248ENST00000637774 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
CACNA1A-248ENST00000637774 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
CACNA1A-248ENST00000637774 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
CACNA1A-248ENST00000637774 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
CACNA1A-248ENST00000637774 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
CACNA1A-248ENST00000637774 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
CACNA1A-248ENST00000637774 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 49.2 ms