RNA–Protein interactions for RNA: ENST00000636969.1

SMARCA2-256, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-256	ENST00000636969	TMEM258	P61165	79 aa		0.31	□□□□□ -2.36
SMARCA2-256	ENST00000636969	RPS28	P62857	69 aa	Known RBP	0.31	□□□□□ -2.36
SMARCA2-256	ENST00000636969	COA5	Q86WW8	74 aa		0.31	□□□□□ -2.36
SMARCA2-256	ENST00000636969	C10orf95	Q9H7T3	257 aa		0.31	□□□□□ -2.36
SMARCA2-256	ENST00000636969	SSPO	A2VEC9	5147 aa		0.31	□□□□□ -2.36
SMARCA2-256	ENST00000636969		A0A0D9SG42	100 aa		0.3	□□□□□ -2.36
SMARCA2-256	ENST00000636969		A0A1B0GV90	55 aa		0.3	□□□□□ -2.36
SMARCA2-256	ENST00000636969	KRTAP5-5	Q701N2	237 aa	Predicted RBP	0.3	□□□□□ -2.36
SMARCA2-256	ENST00000636969	ANAPC13	Q9BS18	74 aa		0.3	□□□□□ -2.36
SMARCA2-256	ENST00000636969	FSIP2	Q5CZC0	6907 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969	LPA	P08519	4548 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969	MT1B	P07438	61 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969		P0C880	135 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969	MT1G	P13640	62 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969	COX7C	P15954	63 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969	KRTAP12-4	P60329	112 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969	KRTAP25-1	Q3LHN0	102 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969	KRTAP5-2	Q701N4	177 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969	BRK1	Q8WUW1	75 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969	CDC42SE1	Q9NRR8	79 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969	SNURF	Q9Y675	71 aa		0.29	□□□□□ -2.36
SMARCA2-256	ENST00000636969	MUC17	Q685J3	4493 aa		0.28	□□□□□ -2.36
SMARCA2-256	ENST00000636969	SPRR5	A0A1B0GTR4	108 aa		0.28	□□□□□ -2.36
SMARCA2-256	ENST00000636969		A6NED7	52 aa		0.28	□□□□□ -2.36
SMARCA2-256	ENST00000636969	MT1X	P80297	61 aa		0.28	□□□□□ -2.36
SMARCA2-256	ENST00000636969	MIR22HG	Q0VDD5	57 aa		0.28	□□□□□ -2.36
SMARCA2-256	ENST00000636969	KRTAP19-3	Q7Z4W3	81 aa		0.28	□□□□□ -2.36
SMARCA2-256	ENST00000636969	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	0.27	□□□□□ -2.37
SMARCA2-256	ENST00000636969	LOC105371267	A0A1B0GV96	52 aa		0.27	□□□□□ -2.37
SMARCA2-256	ENST00000636969	KRTAP5-8	O75690	187 aa		0.27	□□□□□ -2.37
SMARCA2-256	ENST00000636969	KRTAP12-3	P60328	96 aa		0.27	□□□□□ -2.37
SMARCA2-256	ENST00000636969	KRTAP13-4	Q3LI77	160 aa		0.27	□□□□□ -2.37
SMARCA2-256	ENST00000636969	SPATA8	Q6RVD6	105 aa		0.27	□□□□□ -2.37
SMARCA2-256	ENST00000636969	LCE3D	Q9BYE3	92 aa		0.27	□□□□□ -2.37
SMARCA2-256	ENST00000636969	LINC01558	Q9Y6Z2	57 aa		0.27	□□□□□ -2.37
SMARCA2-256	ENST00000636969	SYNE2	Q8WXH0	6885 aa	Known RBP	0.26	□□□□□ -2.37
SMARCA2-256	ENST00000636969	USH2A	O75445	5202 aa		0.26	□□□□□ -2.37
SMARCA2-256	ENST00000636969	CCDC179	H3BU77	68 aa		0.26	□□□□□ -2.37
SMARCA2-256	ENST00000636969	MT1E	P04732	61 aa		0.26	□□□□□ -2.37
SMARCA2-256	ENST00000636969	MT4	P47944	62 aa		0.26	□□□□□ -2.37
SMARCA2-256	ENST00000636969	KRTAP12-1	P59990	96 aa		0.26	□□□□□ -2.37
SMARCA2-256	ENST00000636969	ROMO1	P60602	79 aa		0.26	□□□□□ -2.37
SMARCA2-256	ENST00000636969		Q1T7F1	81 aa		0.26	□□□□□ -2.37
SMARCA2-256	ENST00000636969	MT1M	Q8N339	61 aa		0.26	□□□□□ -2.37
SMARCA2-256	ENST00000636969	NEB	P20929	6669 aa		0.26	□□□□□ -2.37
SMARCA2-256	ENST00000636969	PSPHP1	O15172	72 aa		0.25	□□□□□ -2.37
SMARCA2-256	ENST00000636969	KRTAP19-5	Q3LI72	72 aa		0.25	□□□□□ -2.37
SMARCA2-256	ENST00000636969	KRTAP5-7	Q6L8G8	165 aa		0.25	□□□□□ -2.37
SMARCA2-256	ENST00000636969	MT1L	Q93083	61 aa		0.25	□□□□□ -2.37
SMARCA2-256	ENST00000636969	MUC19	Q7Z5P9	8384 aa		0.25	□□□□□ -2.37
SMARCA2-256	ENST00000636969	KRTAP19-7	Q3SYF9	63 aa		0.24	□□□□□ -2.37
SMARCA2-256	ENST00000636969	LUZP6	Q538Z0	58 aa		0.24	□□□□□ -2.37
SMARCA2-256	ENST00000636969	MDN1	Q9NU22	5596 aa		0.23	□□□□□ -2.37
SMARCA2-256	ENST00000636969	KMT2D	O14686	5537 aa		0.23	□□□□□ -2.37
SMARCA2-256	ENST00000636969	MT1A	P04731	61 aa		0.23	□□□□□ -2.37
SMARCA2-256	ENST00000636969	KRTAP20-2	Q3LI61	65 aa		0.23	□□□□□ -2.37
SMARCA2-256	ENST00000636969	KRTAP5-10	Q6L8G5	202 aa		0.23	□□□□□ -2.37
SMARCA2-256	ENST00000636969	PMAIP1	Q13794	54 aa		0.22	□□□□□ -2.37
SMARCA2-256	ENST00000636969	MACF1	Q9UPN3	7388 aa	Known RBP	0.22	□□□□□ -2.37
SMARCA2-256	ENST00000636969	KRTAP21-2	Q3LI59	83 aa		0.21	□□□□□ -2.38
SMARCA2-256	ENST00000636969	GPR98	Q8WXG9	6306 aa		0.21	□□□□□ -2.38
SMARCA2-256	ENST00000636969	HMCN1	Q96RW7	5635 aa		0.21	□□□□□ -2.38
SMARCA2-256	ENST00000636969	MUC12	Q9UKN1	5478 aa		0.2	□□□□□ -2.38
SMARCA2-256	ENST00000636969	KRTAP6-1	Q3LI64	71 aa		0.2	□□□□□ -2.38
SMARCA2-256	ENST00000636969	KRTAP6-2	Q3LI66	62 aa		0.2	□□□□□ -2.38
SMARCA2-256	ENST00000636969	AHNAK2	Q8IVF2	5795 aa		0.19	□□□□□ -2.38
SMARCA2-256	ENST00000636969	AHNAK	Q09666	5890 aa	Known RBP	0.19	□□□□□ -2.38
SMARCA2-256	ENST00000636969	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.19	□□□□□ -2.38
SMARCA2-256	ENST00000636969	KTN1-AS1	Q86SY8	53 aa		0.18	□□□□□ -2.38
SMARCA2-256	ENST00000636969	PRO0628	Q9UI54	55 aa		0.18	□□□□□ -2.38
SMARCA2-256	ENST00000636969	MUC5AC	P98088	5654 aa		0.17	□□□□□ -2.38
SMARCA2-256	ENST00000636969	PHGR1	C9JFL3	82 aa		0.17	□□□□□ -2.38
SMARCA2-256	ENST00000636969	INE1	O15225	51 aa		0.15	□□□□□ -2.39
SMARCA2-256	ENST00000636969	KRTAP21-1	Q3LI58	79 aa		0.15	□□□□□ -2.39
SMARCA2-256	ENST00000636969	DST	Q03001	7570 aa	Known RBP	0.15	□□□□□ -2.39
SMARCA2-256	ENST00000636969	SYNE1	Q8NF91	8797 aa	Known RBP	0.13	□□□□□ -2.39
SMARCA2-256	ENST00000636969	PRM1	P04553	51 aa		0.11	□□□□□ -2.39
SMARCA2-256	ENST00000636969	MUC16	Q8WXI7	14507 aa		0.06	□□□□□ -2.4

Retrieved 78 of 20,778 RNA–protein pairs in 50.7 ms