RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 KRTAP4-3Q9BYR4 195 aa6.53□□□□□ -1.36
CLN5-216ENST00000636780 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
CLN5-216ENST00000636780 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
CLN5-216ENST00000636780 MACF1Q9UPN3 7388 aaKnown RBP6.44□□□□□ -1.38
CLN5-216ENST00000636780 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
CLN5-216ENST00000636780 CRCT1Q9UGL9 99 aa6.32□□□□□ -1.4
CLN5-216ENST00000636780 MT1GP13640 62 aa6.3□□□□□ -1.4
CLN5-216ENST00000636780 MDN1Q9NU22 5596 aa6.23□□□□□ -1.41
CLN5-216ENST00000636780 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
CLN5-216ENST00000636780 MT1MQ8N339 61 aa6.2□□□□□ -1.42
CLN5-216ENST00000636780 KRTAP19-3Q7Z4W3 81 aa6.19□□□□□ -1.42
CLN5-216ENST00000636780 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
CLN5-216ENST00000636780 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
CLN5-216ENST00000636780 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
CLN5-216ENST00000636780 SYNE1Q8NF91 8797 aaKnown RBP6.05□□□□□ -1.44
CLN5-216ENST00000636780 KRTAP9-2Q9BYQ4 174 aa6.03□□□□□ -1.44
CLN5-216ENST00000636780 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
CLN5-216ENST00000636780 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
CLN5-216ENST00000636780 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
CLN5-216ENST00000636780 OBSCNQ5VST9 7968 aa5.78□□□□□ -1.48
CLN5-216ENST00000636780 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
CLN5-216ENST00000636780 LCE1AQ5T7P2 110 aa5.75□□□□□ -1.49
CLN5-216ENST00000636780 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
CLN5-216ENST00000636780 SPRR2EP22531 72 aa5.67□□□□□ -1.5
CLN5-216ENST00000636780 SPRR2BP35325 72 aa5.67□□□□□ -1.5
CLN5-216ENST00000636780 SPRR2AP35326 72 aa5.67□□□□□ -1.5
CLN5-216ENST00000636780 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
CLN5-216ENST00000636780 KRTAP5-9P26371 169 aa5.62□□□□□ -1.51
CLN5-216ENST00000636780 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
CLN5-216ENST00000636780 MT1AP04731 61 aa5.43□□□□□ -1.54
CLN5-216ENST00000636780 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
CLN5-216ENST00000636780 SPRR2DP22532 72 aa5.4□□□□□ -1.55
CLN5-216ENST00000636780 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
CLN5-216ENST00000636780 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
CLN5-216ENST00000636780 KRTAP6-3Q3LI67 103 aa5.22□□□□□ -1.57
CLN5-216ENST00000636780 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
CLN5-216ENST00000636780 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
CLN5-216ENST00000636780 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
CLN5-216ENST00000636780 LCE3EQ5T5B0 92 aa5.1□□□□□ -1.59
CLN5-216ENST00000636780 NEBP20929 6669 aa5.01□□□□□ -1.61
CLN5-216ENST00000636780 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
CLN5-216ENST00000636780 MT4P47944 62 aa4.93□□□□□ -1.62
CLN5-216ENST00000636780 PRM1P04553 51 aa4.92□□□□□ -1.62
CLN5-216ENST00000636780 MT3P25713 68 aa4.89□□□□□ -1.63
CLN5-216ENST00000636780 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
CLN5-216ENST00000636780 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
CLN5-216ENST00000636780 HMCN1Q96RW7 5635 aa4.75□□□□□ -1.65
CLN5-216ENST00000636780 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
CLN5-216ENST00000636780 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
CLN5-216ENST00000636780 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
CLN5-216ENST00000636780 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
CLN5-216ENST00000636780 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
CLN5-216ENST00000636780 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.7
CLN5-216ENST00000636780 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
CLN5-216ENST00000636780 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
CLN5-216ENST00000636780 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
CLN5-216ENST00000636780 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
CLN5-216ENST00000636780 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
CLN5-216ENST00000636780 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
CLN5-216ENST00000636780 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.8
CLN5-216ENST00000636780 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
CLN5-216ENST00000636780 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
CLN5-216ENST00000636780 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
CLN5-216ENST00000636780 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
CLN5-216ENST00000636780 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
CLN5-216ENST00000636780 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
CLN5-216ENST00000636780 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
CLN5-216ENST00000636780 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
CLN5-216ENST00000636780 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
CLN5-216ENST00000636780 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
CLN5-216ENST00000636780 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
CLN5-216ENST00000636780 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
CLN5-216ENST00000636780 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
CLN5-216ENST00000636780 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
CLN5-216ENST00000636780 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
CLN5-216ENST00000636780 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
CLN5-216ENST00000636780 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
CLN5-216ENST00000636780 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 43.1 ms