RNA–Protein interactions for RNA: ENST00000636448.1

CACNA1D-209, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 3,978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-209ENST00000636448 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
CACNA1D-209ENST00000636448 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
CACNA1D-209ENST00000636448 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
CACNA1D-209ENST00000636448 LOC100996750A0A140TA64 210 aa2.75□□□□□ -1.97
CACNA1D-209ENST00000636448 MT1LQ93083 61 aa2.67□□□□□ -1.98
CACNA1D-209ENST00000636448 MT1EP04732 61 aa2.64□□□□□ -1.99
CACNA1D-209ENST00000636448 KRTAP9-2Q9BYQ4 174 aa2.64□□□□□ -1.99
CACNA1D-209ENST00000636448 MUC12Q9UKN1 5478 aa2.63□□□□□ -1.99
CACNA1D-209ENST00000636448 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
CACNA1D-209ENST00000636448 KRTAP19-4Q3LI73 84 aa2.62□□□□□ -1.99
CACNA1D-209ENST00000636448 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
CACNA1D-209ENST00000636448 KRTAP19-7Q3SYF9 63 aa2.6□□□□□ -1.99
CACNA1D-209ENST00000636448 KRTAP9-6A0A140TA67 174 aa2.59□□□□□ -1.99
CACNA1D-209ENST00000636448 SPRR2EP22531 72 aa2.58□□□□□ -2
CACNA1D-209ENST00000636448 SPRR2BP35325 72 aa2.58□□□□□ -2
CACNA1D-209ENST00000636448 SPRR2AP35326 72 aa2.58□□□□□ -2
CACNA1D-209ENST00000636448 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
CACNA1D-209ENST00000636448 KRTAP19-3Q7Z4W3 81 aa2.57□□□□□ -2
CACNA1D-209ENST00000636448 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
CACNA1D-209ENST00000636448 MT1MQ8N339 61 aa2.53□□□□□ -2
CACNA1D-209ENST00000636448 SSPOA2VEC9 5147 aa2.52□□□□□ -2.01
CACNA1D-209ENST00000636448 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
CACNA1D-209ENST00000636448 PRM1P04553 51 aa2.47□□□□□ -2.01
CACNA1D-209ENST00000636448 SPRR2DP22532 72 aa2.45□□□□□ -2.02
CACNA1D-209ENST00000636448 LCE4AQ5TA78 99 aa2.45□□□□□ -2.02
CACNA1D-209ENST00000636448 KRTAP19-6Q3LI70 58 aa2.44□□□□□ -2.02
CACNA1D-209ENST00000636448 KRTAP2-3P0C7H8 128 aa2.44□□□□□ -2.02
CACNA1D-209ENST00000636448 KRTAP2-4Q9BYR9 128 aa2.44□□□□□ -2.02
CACNA1D-209ENST00000636448 KRTAP2-1Q9BYU5 128 aa2.44□□□□□ -2.02
CACNA1D-209ENST00000636448 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
CACNA1D-209ENST00000636448 KRTAP9-7A8MTY7 169 aa2.37□□□□□ -2.03
CACNA1D-209ENST00000636448 MT4P47944 62 aa2.35□□□□□ -2.03
CACNA1D-209ENST00000636448 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.34□□□□□ -2.03
CACNA1D-209ENST00000636448 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.04
CACNA1D-209ENST00000636448 KRTAP4-6Q9BYQ5 205 aa2.3□□□□□ -2.04
CACNA1D-209ENST00000636448 MDN1Q9NU22 5596 aa2.28□□□□□ -2.04
CACNA1D-209ENST00000636448 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
CACNA1D-209ENST00000636448 MT3P25713 68 aa2.26□□□□□ -2.05
CACNA1D-209ENST00000636448 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
CACNA1D-209ENST00000636448 MT1AP04731 61 aa2.25□□□□□ -2.05
CACNA1D-209ENST00000636448 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
CACNA1D-209ENST00000636448 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
CACNA1D-209ENST00000636448 KRTAP9-4Q9BYQ2 154 aa2.22□□□□□ -2.05
CACNA1D-209ENST00000636448 LCE5AQ5TCM9 118 aa2.22□□□□□ -2.05
CACNA1D-209ENST00000636448 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
CACNA1D-209ENST00000636448 KRTAP2-2Q9BYT5 123 aa2.19□□□□□ -2.06
CACNA1D-209ENST00000636448 LCE1AQ5T7P2 110 aa2.18□□□□□ -2.06
CACNA1D-209ENST00000636448 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
CACNA1D-209ENST00000636448 NEBP20929 6669 aa2.14□□□□□ -2.07
CACNA1D-209ENST00000636448 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
CACNA1D-209ENST00000636448 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
CACNA1D-209ENST00000636448 KRTAP9-9Q9BYP9 154 aa2.08□□□□□ -2.08
CACNA1D-209ENST00000636448 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
CACNA1D-209ENST00000636448 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
CACNA1D-209ENST00000636448 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
CACNA1D-209ENST00000636448 KRTAP5-5Q701N2 237 aaPredicted RBP1.92□□□□□ -2.1
CACNA1D-209ENST00000636448 KRTAP4-11Q9BYQ6 195 aa1.92□□□□□ -2.1
CACNA1D-209ENST00000636448 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
CACNA1D-209ENST00000636448 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
CACNA1D-209ENST00000636448 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
CACNA1D-209ENST00000636448 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
CACNA1D-209ENST00000636448 KRTAP5-3Q6L8H2 238 aa1.8□□□□□ -2.12
CACNA1D-209ENST00000636448 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
CACNA1D-209ENST00000636448 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
CACNA1D-209ENST00000636448 KRTAP4-2Q9BYR5 136 aa1.76□□□□□ -2.13
CACNA1D-209ENST00000636448 KRTAP20-2Q3LI61 65 aa1.76□□□□□ -2.13
CACNA1D-209ENST00000636448 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
CACNA1D-209ENST00000636448 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
CACNA1D-209ENST00000636448 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
CACNA1D-209ENST00000636448 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
CACNA1D-209ENST00000636448 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.57□□□□□ -2.16
CACNA1D-209ENST00000636448 KRTAP5-8O75690 187 aa1.46□□□□□ -2.18
CACNA1D-209ENST00000636448 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
CACNA1D-209ENST00000636448 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
CACNA1D-209ENST00000636448 KRTAP5-11Q6L8G4 156 aa1.23□□□□□ -2.21
CACNA1D-209ENST00000636448 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
CACNA1D-209ENST00000636448 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
CACNA1D-209ENST00000636448 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 101.3 ms