RNA–Protein interactions for RNA: ENST00000636448.1

CACNA1D-209, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 3,978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-209ENST00000636448 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
CACNA1D-209ENST00000636448 SUPT5HO00267 1087 aaKnown RBP13.96□□□□□ -0.18
CACNA1D-209ENST00000636448 NISCHQ9Y2I1 1504 aa13.82□□□□□ -0.2
CACNA1D-209ENST00000636448 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
CACNA1D-209ENST00000636448 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
CACNA1D-209ENST00000636448 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
CACNA1D-209ENST00000636448 FAM9AQ8IZU1 332 aaPredicted RBP13.19□□□□□ -0.3
CACNA1D-209ENST00000636448 TTBK1Q5TCY1 1321 aaPredicted RBP13.16□□□□□ -0.3
CACNA1D-209ENST00000636448 PPARGC1BQ86YN6 1023 aaKnown RBP12.92□□□□□ -0.34
CACNA1D-209ENST00000636448 LOC105371045A0A1W2PR82 267 aa12.81□□□□□ -0.36
CACNA1D-209ENST00000636448 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.36
CACNA1D-209ENST00000636448 HRCP23327 699 aa12.73□□□□□ -0.37
CACNA1D-209ENST00000636448 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
CACNA1D-209ENST00000636448 CCER1Q8TC90 406 aaPredicted RBP12.67□□□□□ -0.38
CACNA1D-209ENST00000636448 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
CACNA1D-209ENST00000636448 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
CACNA1D-209ENST00000636448 APLP2Q06481 763 aa12.5□□□□□ -0.41
CACNA1D-209ENST00000636448 TRIM26Q12899 539 aaPredicted RBP12.47□□□□□ -0.41
CACNA1D-209ENST00000636448 CENPBP07199 599 aaPredicted RBP12.46□□□□□ -0.42
CACNA1D-209ENST00000636448 ZEB1P37275 1124 aaPredicted RBP12.43□□□□□ -0.42
CACNA1D-209ENST00000636448 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
CACNA1D-209ENST00000636448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
CACNA1D-209ENST00000636448 PELP1Q8IZL8 1130 aaKnown RBP12.34□□□□□ -0.43
CACNA1D-209ENST00000636448 ATP1B4Q9UN42 357 aaPredicted RBP12.31□□□□□ -0.44
CACNA1D-209ENST00000636448 HNRNPUL2Q1KMD3 747 aaKnown RBP12.28□□□□□ -0.44
CACNA1D-209ENST00000636448 ITGAEP38570 1179 aa12.24□□□□□ -0.45
CACNA1D-209ENST00000636448 DIEXFQ68CQ4 756 aaKnown RBP12.15□□□□□ -0.46
CACNA1D-209ENST00000636448 GTF3C3Q9Y5Q9 886 aa12.14□□□□□ -0.47
CACNA1D-209ENST00000636448 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
CACNA1D-209ENST00000636448 ERICH6Q7L0X2 663 aa12.09□□□□□ -0.47
CACNA1D-209ENST00000636448 BCANQ96GW7 911 aa12.02□□□□□ -0.49
CACNA1D-209ENST00000636448 NEFLP07196 543 aa12□□□□□ -0.49
CACNA1D-209ENST00000636448 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.49
CACNA1D-209ENST00000636448 POLR3GLQ9BT43 218 aa11.94□□□□□ -0.5
CACNA1D-209ENST00000636448 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
CACNA1D-209ENST00000636448 ACIN1Q9UKV3 1341 aaKnown RBP11.9□□□□□ -0.5
CACNA1D-209ENST00000636448 NEUROD1Q13562 356 aa11.9□□□□□ -0.5
CACNA1D-209ENST00000636448 MYT1Q01538 1121 aa11.84□□□□□ -0.51
CACNA1D-209ENST00000636448 ABCC9O60706 1549 aa11.83□□□□□ -0.51
CACNA1D-209ENST00000636448 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
CACNA1D-209ENST00000636448 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
CACNA1D-209ENST00000636448 FAM50AQ14320 339 aaKnown RBP11.74□□□□□ -0.53
CACNA1D-209ENST00000636448 MIER1Q8N108 512 aa11.67□□□□□ -0.54
CACNA1D-209ENST00000636448 P3H3Q8IVL6 736 aa11.65□□□□□ -0.54
CACNA1D-209ENST00000636448 HIRIP3Q9BW71 556 aaPredicted RBP11.63□□□□□ -0.55
CACNA1D-209ENST00000636448 DCAF1Q9Y4B6 1507 aa11.62□□□□□ -0.55
CACNA1D-209ENST00000636448 ARID3CA6NKF2 412 aa11.6□□□□□ -0.55
CACNA1D-209ENST00000636448 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
CACNA1D-209ENST00000636448 FKBP8Q14318 412 aa11.57□□□□□ -0.56
CACNA1D-209ENST00000636448 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
CACNA1D-209ENST00000636448 TRIM52Q96A61 297 aa11.56□□□□□ -0.56
CACNA1D-209ENST00000636448 DDX10Q13206 875 aaKnown RBP11.56□□□□□ -0.56
CACNA1D-209ENST00000636448 SENP3-EIF4A1A0A087X0R7 540 aa11.54□□□□□ -0.56
CACNA1D-209ENST00000636448 IRX6P78412 446 aaPredicted RBP11.52□□□□□ -0.56
CACNA1D-209ENST00000636448 ANP32CO43423 234 aa11.5□□□□□ -0.57
CACNA1D-209ENST00000636448 ZCCHC6Q5VYS8 1495 aaKnown RBP11.48□□□□□ -0.57
CACNA1D-209ENST00000636448 DAXXQ9UER7 740 aaPredicted RBP11.46□□□□□ -0.57
CACNA1D-209ENST00000636448 SCRIBQ14160 1630 aa11.46□□□□□ -0.58
CACNA1D-209ENST00000636448 MYT1LQ9UL68 1186 aa11.45□□□□□ -0.58
CACNA1D-209ENST00000636448 RTL5Q5HYW3 569 aaPredicted RBP11.43□□□□□ -0.58
CACNA1D-209ENST00000636448 CDK11AQ9UQ88 783 aaPredicted RBP11.43□□□□□ -0.58
CACNA1D-209ENST00000636448 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
CACNA1D-209ENST00000636448 SALL2Q9Y467 1007 aaPredicted RBP11.42□□□□□ -0.58
CACNA1D-209ENST00000636448 HNRNPUQ00839 825 aaKnown RBP eCLIP11.41□□□□□ -0.58
CACNA1D-209ENST00000636448 NPM2Q86SE8 214 aaKnown RBP11.41□□□□□ -0.58
CACNA1D-209ENST00000636448 BCL11AQ9H165 835 aa11.39□□□□□ -0.59
CACNA1D-209ENST00000636448 CLSPNQ9HAW4 1339 aa11.39□□□□□ -0.59
CACNA1D-209ENST00000636448 FAM9BQ8IZU0 186 aa11.38□□□□□ -0.59
CACNA1D-209ENST00000636448 NBR1Q14596 966 aa11.35□□□□□ -0.59
CACNA1D-209ENST00000636448 CHIC2Q9UKJ5 165 aa11.34□□□□□ -0.59
CACNA1D-209ENST00000636448 CCDC180Q9P1Z9 1646 aa11.31□□□□□ -0.6
CACNA1D-209ENST00000636448 RSF1Q96T23 1441 aaPredicted RBP11.3□□□□□ -0.6
CACNA1D-209ENST00000636448 FBLN2P98095 1184 aa11.27□□□□□ -0.6
CACNA1D-209ENST00000636448 ZNF777Q9ULD5 760 aaPredicted RBP11.27□□□□□ -0.61
CACNA1D-209ENST00000636448 CEP162Q5TB80 1403 aa11.26□□□□□ -0.61
CACNA1D-209ENST00000636448 SIN3AQ96ST3 1273 aa11.26□□□□□ -0.61
CACNA1D-209ENST00000636448 SUPT16HQ9Y5B9 1047 aaKnown RBP11.24□□□□□ -0.61
CACNA1D-209ENST00000636448 TONSLQ96HA7 1378 aa11.22□□□□□ -0.61
CACNA1D-209ENST00000636448 CLIP1P30622 1438 aa11.21□□□□□ -0.61
CACNA1D-209ENST00000636448 EIF5BO60841 1220 aaKnown RBP11.2□□□□□ -0.62
CACNA1D-209ENST00000636448 ARXQ96QS3 562 aa11.19□□□□□ -0.62
CACNA1D-209ENST00000636448 KCNH8Q96L42 1107 aa11.18□□□□□ -0.62
CACNA1D-209ENST00000636448 MRS2Q9HD23 443 aa11.18□□□□□ -0.62
CACNA1D-209ENST00000636448 ANP32AP39687 249 aaKnown RBP11.17□□□□□ -0.62
CACNA1D-209ENST00000636448 RRP7BPQ9NSQ0 103 aa11.17□□□□□ -0.62
CACNA1D-209ENST00000636448 CECR2Q9BXF3 1484 aa11.16□□□□□ -0.62
CACNA1D-209ENST00000636448 SOGA1O94964 1423 aa11.15□□□□□ -0.62
CACNA1D-209ENST00000636448 CCDC136Q96JN2 1154 aa11.15□□□□□ -0.62
CACNA1D-209ENST00000636448 ANP32EQ9BTT0 268 aa11.15□□□□□ -0.62
CACNA1D-209ENST00000636448 KDM2AQ9Y2K7 1162 aa11.15□□□□□ -0.63
CACNA1D-209ENST00000636448 SENP3Q9H4L4 574 aaPredicted RBP11.14□□□□□ -0.63
CACNA1D-209ENST00000636448 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
CACNA1D-209ENST00000636448 B4GALNT3Q6L9W6 998 aa11.1□□□□□ -0.63
CACNA1D-209ENST00000636448 RB1CC1Q8TDY2 1594 aa11.09□□□□□ -0.63
CACNA1D-209ENST00000636448 KANK4Q5T7N3 995 aaPredicted RBP11.09□□□□□ -0.63
CACNA1D-209ENST00000636448 TMC1Q8TDI8 760 aa11.08□□□□□ -0.64
CACNA1D-209ENST00000636448 CANXP27824 592 aaKnown RBP11.08□□□□□ -0.64
CACNA1D-209ENST00000636448 ZBTB47Q9UFB7 747 aaPredicted RBP11.06□□□□□ -0.64
CACNA1D-209ENST00000636448 TSHZ2Q9NRE2 1034 aa11.05□□□□□ -0.64
CACNA1D-209ENST00000636448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms