RNA–Protein interactions for RNA: ENST00000636227.1

ARID1B-214, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 6,386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-214ENST00000636227 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
ARID1B-214ENST00000636227 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
ARID1B-214ENST00000636227 KRTAP19-3Q7Z4W3 81 aa2.98□□□□□ -1.93
ARID1B-214ENST00000636227 HMCN2Q8NDA2 5059 aa2.94□□□□□ -1.94
ARID1B-214ENST00000636227 LCE2AQ5TA79 106 aaPredicted RBP2.93□□□□□ -1.94
ARID1B-214ENST00000636227 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
ARID1B-214ENST00000636227 MT1LQ93083 61 aa2.92□□□□□ -1.94
ARID1B-214ENST00000636227 FSIP2Q5CZC0 6907 aa2.9□□□□□ -1.95
ARID1B-214ENST00000636227 MT1EP04732 61 aa2.89□□□□□ -1.95
ARID1B-214ENST00000636227 PRM1P04553 51 aa2.89□□□□□ -1.95
ARID1B-214ENST00000636227 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
ARID1B-214ENST00000636227 KRTAP19-2Q3LHN2 52 aa2.87□□□□□ -1.95
ARID1B-214ENST00000636227 FAT4Q6V0I7 4981 aa2.84□□□□□ -1.95
ARID1B-214ENST00000636227 MT1MQ8N339 61 aa2.84□□□□□ -1.95
ARID1B-214ENST00000636227 KRTAP19-6Q3LI70 58 aa2.84□□□□□ -1.95
ARID1B-214ENST00000636227 LCE5AQ5TCM9 118 aa2.84□□□□□ -1.95
ARID1B-214ENST00000636227 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
ARID1B-214ENST00000636227 MT3P25713 68 aa2.8□□□□□ -1.96
ARID1B-214ENST00000636227 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
ARID1B-214ENST00000636227 KRTAP9-7A8MTY7 169 aa2.74□□□□□ -1.97
ARID1B-214ENST00000636227 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.68□□□□□ -1.98
ARID1B-214ENST00000636227 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
ARID1B-214ENST00000636227 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
ARID1B-214ENST00000636227 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
ARID1B-214ENST00000636227 LCE1AQ5T7P2 110 aa2.67□□□□□ -1.98
ARID1B-214ENST00000636227 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
ARID1B-214ENST00000636227 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
ARID1B-214ENST00000636227 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
ARID1B-214ENST00000636227 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
ARID1B-214ENST00000636227 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
ARID1B-214ENST00000636227 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
ARID1B-214ENST00000636227 MUC2Q02817 5179 aa2.56□□□□□ -2
ARID1B-214ENST00000636227 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
ARID1B-214ENST00000636227 MT1AP04731 61 aa2.54□□□□□ -2
ARID1B-214ENST00000636227 USH2AO75445 5202 aa2.5□□□□□ -2.01
ARID1B-214ENST00000636227 KRTAP9-4Q9BYQ2 154 aa2.43□□□□□ -2.02
ARID1B-214ENST00000636227 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
ARID1B-214ENST00000636227 KRTAP9-6A8MVA2 160 aa2.41□□□□□ -2.02
ARID1B-214ENST00000636227 KRTAP2-2Q9BYT5 123 aa2.41□□□□□ -2.02
ARID1B-214ENST00000636227 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
ARID1B-214ENST00000636227 SSPOA2VEC9 5147 aa2.35□□□□□ -2.03
ARID1B-214ENST00000636227 LCE4AQ5TA78 99 aa2.35□□□□□ -2.03
ARID1B-214ENST00000636227 FCGBPQ9Y6R7 5405 aaPredicted RBP2.35□□□□□ -2.03
ARID1B-214ENST00000636227 KMT2DO14686 5537 aa2.34□□□□□ -2.04
ARID1B-214ENST00000636227 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
ARID1B-214ENST00000636227 NEBP20929 6669 aa2.29□□□□□ -2.04
ARID1B-214ENST00000636227 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
ARID1B-214ENST00000636227 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
ARID1B-214ENST00000636227 MACF1Q9UPN3 7388 aaKnown RBP2.26□□□□□ -2.05
ARID1B-214ENST00000636227 KRTAP4-6Q9BYQ5 205 aa2.24□□□□□ -2.05
ARID1B-214ENST00000636227 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
ARID1B-214ENST00000636227 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
ARID1B-214ENST00000636227 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
ARID1B-214ENST00000636227 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
ARID1B-214ENST00000636227 KRTAP4-2Q9BYR5 136 aa2.21□□□□□ -2.06
ARID1B-214ENST00000636227 MDN1Q9NU22 5596 aa2.19□□□□□ -2.06
ARID1B-214ENST00000636227 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
ARID1B-214ENST00000636227 MUC12Q9UKN1 5478 aa2.07□□□□□ -2.08
ARID1B-214ENST00000636227 KRTAP5-4Q6L8H1 288 aa1.92□□□□□ -2.1
ARID1B-214ENST00000636227 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
ARID1B-214ENST00000636227 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
ARID1B-214ENST00000636227 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
ARID1B-214ENST00000636227 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
ARID1B-214ENST00000636227 KRTAP5-3Q6L8H2 238 aa1.75□□□□□ -2.13
ARID1B-214ENST00000636227 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
ARID1B-214ENST00000636227 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
ARID1B-214ENST00000636227 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
ARID1B-214ENST00000636227 MUC5ACP98088 5654 aa1.6□□□□□ -2.15
ARID1B-214ENST00000636227 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
ARID1B-214ENST00000636227 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
ARID1B-214ENST00000636227 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
ARID1B-214ENST00000636227 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
ARID1B-214ENST00000636227 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
ARID1B-214ENST00000636227 KRTAP5-1Q6L8H4 278 aa1.35□□□□□ -2.19
ARID1B-214ENST00000636227 KRTAP5-11Q6L8G4 156 aa1.29□□□□□ -2.2
ARID1B-214ENST00000636227 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
ARID1B-214ENST00000636227 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
ARID1B-214ENST00000636227 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 239.8 ms