RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 KRTAP19-2Q3LHN2 52 aa2.19□□□□□ -2.06
GABRB3-218ENST00000635994 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
GABRB3-218ENST00000635994 MT1BP07438 61 aa2.16□□□□□ -2.06
GABRB3-218ENST00000635994 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.06
GABRB3-218ENST00000635994 KRTAP4-8A0A0G2JLE6 195 aa2.13□□□□□ -2.07
GABRB3-218ENST00000635994 MT1XP80297 61 aa2.12□□□□□ -2.07
GABRB3-218ENST00000635994 MT3P25713 68 aa2.12□□□□□ -2.07
GABRB3-218ENST00000635994 KRTAP19-3Q7Z4W3 81 aa2.11□□□□□ -2.07
GABRB3-218ENST00000635994 KRTAP9-7A8MTY7 169 aa2.11□□□□□ -2.07
GABRB3-218ENST00000635994 KRTAP9-9Q9BYP9 154 aa2.1□□□□□ -2.07
GABRB3-218ENST00000635994 KRTAP9-4Q9BYQ2 154 aa2.1□□□□□ -2.07
GABRB3-218ENST00000635994 MT1LQ93083 61 aa2.08□□□□□ -2.08
GABRB3-218ENST00000635994 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
GABRB3-218ENST00000635994 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
GABRB3-218ENST00000635994 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
GABRB3-218ENST00000635994 KRTAP4-7Q9BYR0 210 aa2.05□□□□□ -2.08
GABRB3-218ENST00000635994 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
GABRB3-218ENST00000635994 LCE1DQ5T752 114 aa2.01□□□□□ -2.09
GABRB3-218ENST00000635994 MT4P47944 62 aa2□□□□□ -2.09
GABRB3-218ENST00000635994 LCE4AQ5TA78 99 aa2□□□□□ -2.09
GABRB3-218ENST00000635994 MT1EP04732 61 aa1.98□□□□□ -2.09
GABRB3-218ENST00000635994 OBSCNQ5VST9 7968 aa1.98□□□□□ -2.09
GABRB3-218ENST00000635994 KRTAP2-3P0C7H8 128 aa1.97□□□□□ -2.09
GABRB3-218ENST00000635994 KRTAP2-4Q9BYR9 128 aa1.97□□□□□ -2.09
GABRB3-218ENST00000635994 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
GABRB3-218ENST00000635994 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
GABRB3-218ENST00000635994 SSPOA2VEC9 5147 aa1.96□□□□□ -2.1
GABRB3-218ENST00000635994 KRTAP4-9Q9BYQ8 210 aa1.96□□□□□ -2.1
GABRB3-218ENST00000635994 MT1MQ8N339 61 aa1.95□□□□□ -2.1
GABRB3-218ENST00000635994 KRTAP5-3Q6L8H2 238 aa1.9□□□□□ -2.1
GABRB3-218ENST00000635994 LCE1AQ5T7P2 110 aa1.9□□□□□ -2.1
GABRB3-218ENST00000635994 LCE5AQ5TCM9 118 aa1.9□□□□□ -2.11
GABRB3-218ENST00000635994 USH2AO75445 5202 aa1.9□□□□□ -2.11
GABRB3-218ENST00000635994 MT1AP04731 61 aa1.9□□□□□ -2.11
GABRB3-218ENST00000635994 KRTAP2-2Q9BYT5 123 aa1.88□□□□□ -2.11
GABRB3-218ENST00000635994 KRTAP2-1Q9BYU5 128 aa1.88□□□□□ -2.11
GABRB3-218ENST00000635994 SYNE2Q8WXH0 6885 aaKnown RBP1.88□□□□□ -2.11
GABRB3-218ENST00000635994 PRM1P04553 51 aa1.87□□□□□ -2.11
GABRB3-218ENST00000635994 KRTAP4-11Q9BYQ6 195 aa1.87□□□□□ -2.11
GABRB3-218ENST00000635994 NEBP20929 6669 aa1.83□□□□□ -2.12
GABRB3-218ENST00000635994 MACF1Q9UPN3 7388 aaKnown RBP1.82□□□□□ -2.12
GABRB3-218ENST00000635994 FSIP2Q5CZC0 6907 aa1.78□□□□□ -2.12
GABRB3-218ENST00000635994 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
GABRB3-218ENST00000635994 LCE1EQ5T753 118 aa1.78□□□□□ -2.12
GABRB3-218ENST00000635994 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
GABRB3-218ENST00000635994 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
GABRB3-218ENST00000635994 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
GABRB3-218ENST00000635994 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
GABRB3-218ENST00000635994 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
GABRB3-218ENST00000635994 KRTAP5-9P26371 169 aa1.75□□□□□ -2.13
GABRB3-218ENST00000635994 KRTAP4-3Q9BYR4 195 aa1.73□□□□□ -2.13
GABRB3-218ENST00000635994 GPR98Q8WXG9 6306 aa1.71□□□□□ -2.14
GABRB3-218ENST00000635994 MUC12Q9UKN1 5478 aa1.69□□□□□ -2.14
GABRB3-218ENST00000635994 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
GABRB3-218ENST00000635994 MDN1Q9NU22 5596 aa1.64□□□□□ -2.15
GABRB3-218ENST00000635994 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
GABRB3-218ENST00000635994 KMT2DO14686 5537 aa1.59□□□□□ -2.15
GABRB3-218ENST00000635994 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
GABRB3-218ENST00000635994 KRTAP5-4Q6L8H1 288 aa1.51□□□□□ -2.17
GABRB3-218ENST00000635994 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
GABRB3-218ENST00000635994 KRTAP5-2Q701N4 177 aa1.48□□□□□ -2.17
GABRB3-218ENST00000635994 KRTAP9-6A8MVA2 160 aa1.41□□□□□ -2.18
GABRB3-218ENST00000635994 KRTAP5-5Q701N2 237 aaPredicted RBP1.34□□□□□ -2.2
GABRB3-218ENST00000635994 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
GABRB3-218ENST00000635994 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
GABRB3-218ENST00000635994 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
GABRB3-218ENST00000635994 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
GABRB3-218ENST00000635994 KRTAP4-4Q9BYR3 166 aa1.21□□□□□ -2.22
GABRB3-218ENST00000635994 KRTAP5-8O75690 187 aa1.19□□□□□ -2.22
GABRB3-218ENST00000635994 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
GABRB3-218ENST00000635994 KRTAP5-1Q6L8H4 278 aa1.18□□□□□ -2.22
GABRB3-218ENST00000635994 KRTAP5-7Q6L8G8 165 aa1.17□□□□□ -2.22
GABRB3-218ENST00000635994 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
GABRB3-218ENST00000635994 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
GABRB3-218ENST00000635994 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
GABRB3-218ENST00000635994 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
GABRB3-218ENST00000635994 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
GABRB3-218ENST00000635994 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 97.1 ms