RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
PATJ-216ENST00000635214 SPRR2DP22532 72 aa2.98□□□□□ -1.93
PATJ-216ENST00000635214 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
PATJ-216ENST00000635214 MT1GP13640 62 aa2.97□□□□□ -1.93
PATJ-216ENST00000635214 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
PATJ-216ENST00000635214 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
PATJ-216ENST00000635214 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
PATJ-216ENST00000635214 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
PATJ-216ENST00000635214 MT1LQ93083 61 aa2.86□□□□□ -1.95
PATJ-216ENST00000635214 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.96
PATJ-216ENST00000635214 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.96
PATJ-216ENST00000635214 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.96
PATJ-216ENST00000635214 MT1EP04732 61 aa2.83□□□□□ -1.96
PATJ-216ENST00000635214 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
PATJ-216ENST00000635214 KRTAP4-8A0A0G2JLE6 195 aa2.8□□□□□ -1.96
PATJ-216ENST00000635214 KRTAP4-8Q9BYQ9 185 aa2.8□□□□□ -1.96
PATJ-216ENST00000635214 PRM1P04553 51 aa2.75□□□□□ -1.97
PATJ-216ENST00000635214 USH2AO75445 5202 aa2.74□□□□□ -1.97
PATJ-216ENST00000635214 NEBP20929 6669 aa2.72□□□□□ -1.97
PATJ-216ENST00000635214 LCE4AQ5TA78 99 aa2.7□□□□□ -1.98
PATJ-216ENST00000635214 MT1MQ8N339 61 aa2.7□□□□□ -1.98
PATJ-216ENST00000635214 KRTAP4-7Q9BYR0 210 aa2.69□□□□□ -1.98
PATJ-216ENST00000635214 MUC2Q02817 5179 aa2.69□□□□□ -1.98
PATJ-216ENST00000635214 MT3P25713 68 aa2.69□□□□□ -1.98
PATJ-216ENST00000635214 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
PATJ-216ENST00000635214 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
PATJ-216ENST00000635214 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
PATJ-216ENST00000635214 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
PATJ-216ENST00000635214 SYNE2Q8WXH0 6885 aaKnown RBP2.57□□□□□ -2
PATJ-216ENST00000635214 MT1AP04731 61 aa2.57□□□□□ -2
PATJ-216ENST00000635214 FSIP2Q5CZC0 6907 aa2.53□□□□□ -2
PATJ-216ENST00000635214 LOC100996750A0A140TA64 210 aa2.52□□□□□ -2.01
PATJ-216ENST00000635214 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
PATJ-216ENST00000635214 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
PATJ-216ENST00000635214 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.02
PATJ-216ENST00000635214 LCE1DQ5T752 114 aa2.45□□□□□ -2.02
PATJ-216ENST00000635214 MT4P47944 62 aa2.44□□□□□ -2.02
PATJ-216ENST00000635214 KRTAP4-9Q9BYQ8 210 aa2.4□□□□□ -2.02
PATJ-216ENST00000635214 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
PATJ-216ENST00000635214 KRTAP9-4Q9BYQ2 154 aa2.36□□□□□ -2.03
PATJ-216ENST00000635214 KRTAP9-6A8MVA2 160 aa2.36□□□□□ -2.03
PATJ-216ENST00000635214 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
PATJ-216ENST00000635214 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
PATJ-216ENST00000635214 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
PATJ-216ENST00000635214 MDN1Q9NU22 5596 aa2.27□□□□□ -2.05
PATJ-216ENST00000635214 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
PATJ-216ENST00000635214 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
PATJ-216ENST00000635214 KMT2DO14686 5537 aa2.21□□□□□ -2.06
PATJ-216ENST00000635214 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
PATJ-216ENST00000635214 KRTAP9-9Q9BYP9 154 aa2.13□□□□□ -2.07
PATJ-216ENST00000635214 KRTAP4-6Q9BYQ5 205 aa2.12□□□□□ -2.07
PATJ-216ENST00000635214 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
PATJ-216ENST00000635214 MUC12Q9UKN1 5478 aa2.08□□□□□ -2.08
PATJ-216ENST00000635214 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
PATJ-216ENST00000635214 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
PATJ-216ENST00000635214 LCE1EQ5T753 118 aa2.07□□□□□ -2.08
PATJ-216ENST00000635214 LCE1FQ5T754 118 aa2.07□□□□□ -2.08
PATJ-216ENST00000635214 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
PATJ-216ENST00000635214 KRTAP4-11Q9BYQ6 195 aa2.04□□□□□ -2.08
PATJ-216ENST00000635214 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
PATJ-216ENST00000635214 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
PATJ-216ENST00000635214 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
PATJ-216ENST00000635214 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
PATJ-216ENST00000635214 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
PATJ-216ENST00000635214 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.1
PATJ-216ENST00000635214 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
PATJ-216ENST00000635214 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
PATJ-216ENST00000635214 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
PATJ-216ENST00000635214 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
PATJ-216ENST00000635214 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
PATJ-216ENST00000635214 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
PATJ-216ENST00000635214 KRTAP4-2Q9BYR5 136 aa1.57□□□□□ -2.16
PATJ-216ENST00000635214 KRTAP4-12Q9BQ66 201 aa1.56□□□□□ -2.16
PATJ-216ENST00000635214 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
PATJ-216ENST00000635214 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
PATJ-216ENST00000635214 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
PATJ-216ENST00000635214 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
PATJ-216ENST00000635214 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 55.4 ms