RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
ERCC6-213ENST00000624341 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
ERCC6-213ENST00000624341 MT1XP80297 61 aa2.02□□□□□ -2.09
ERCC6-213ENST00000624341 LCE2BO14633 110 aa2□□□□□ -2.09
ERCC6-213ENST00000624341 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
ERCC6-213ENST00000624341 MT1BP07438 61 aa1.99□□□□□ -2.09
ERCC6-213ENST00000624341 KRTAP4-8A0A0G2JLE6 195 aa1.97□□□□□ -2.09
ERCC6-213ENST00000624341 KRTAP4-8Q9BYQ9 185 aa1.97□□□□□ -2.09
ERCC6-213ENST00000624341 MT1GP13640 62 aa1.95□□□□□ -2.1
ERCC6-213ENST00000624341 KRTAP4-7Q9BYR0 210 aa1.9□□□□□ -2.1
ERCC6-213ENST00000624341 KRTAP20-1Q3LI63 56 aa1.89□□□□□ -2.11
ERCC6-213ENST00000624341 SSPOA2VEC9 5147 aa1.89□□□□□ -2.11
ERCC6-213ENST00000624341 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
ERCC6-213ENST00000624341 USH2AO75445 5202 aa1.85□□□□□ -2.11
ERCC6-213ENST00000624341 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
ERCC6-213ENST00000624341 LCE1DQ5T752 114 aa1.84□□□□□ -2.12
ERCC6-213ENST00000624341 KRTAP5-9P26371 169 aa1.83□□□□□ -2.12
ERCC6-213ENST00000624341 FCGBPQ9Y6R7 5405 aaPredicted RBP1.83□□□□□ -2.12
ERCC6-213ENST00000624341 FSIP2Q5CZC0 6907 aa1.83□□□□□ -2.12
ERCC6-213ENST00000624341 KRTAP2-3P0C7H8 128 aa1.83□□□□□ -2.12
ERCC6-213ENST00000624341 LCE3EQ5T5B0 92 aa1.83□□□□□ -2.12
ERCC6-213ENST00000624341 MT1LQ93083 61 aa1.83□□□□□ -2.12
ERCC6-213ENST00000624341 KRTAP2-4Q9BYR9 128 aa1.83□□□□□ -2.12
ERCC6-213ENST00000624341 MT1EP04732 61 aa1.8□□□□□ -2.12
ERCC6-213ENST00000624341 KRTAP19-3Q7Z4W3 81 aa1.79□□□□□ -2.12
ERCC6-213ENST00000624341 NEBP20929 6669 aa1.79□□□□□ -2.12
ERCC6-213ENST00000624341 MT4P47944 62 aa1.79□□□□□ -2.12
ERCC6-213ENST00000624341 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
ERCC6-213ENST00000624341 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
ERCC6-213ENST00000624341 KRTAP4-3Q9BYR4 195 aa1.76□□□□□ -2.13
ERCC6-213ENST00000624341 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
ERCC6-213ENST00000624341 KRTAP2-2Q9BYT5 123 aa1.75□□□□□ -2.13
ERCC6-213ENST00000624341 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
ERCC6-213ENST00000624341 MT1MQ8N339 61 aa1.74□□□□□ -2.13
ERCC6-213ENST00000624341 PRM1P04553 51 aa1.73□□□□□ -2.13
ERCC6-213ENST00000624341 LCE1AQ5T7P2 110 aa1.72□□□□□ -2.13
ERCC6-213ENST00000624341 LCE5AQ5TCM9 118 aa1.71□□□□□ -2.14
ERCC6-213ENST00000624341 KRTAP19-7Q3SYF9 63 aa1.71□□□□□ -2.14
ERCC6-213ENST00000624341 KRTAP4-9Q9BYQ8 210 aa1.68□□□□□ -2.14
ERCC6-213ENST00000624341 KRTAP5-3Q6L8H2 238 aa1.66□□□□□ -2.14
ERCC6-213ENST00000624341 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
ERCC6-213ENST00000624341 LCE1EQ5T753 118 aa1.66□□□□□ -2.14
ERCC6-213ENST00000624341 LCE1FQ5T754 118 aa1.66□□□□□ -2.14
ERCC6-213ENST00000624341 KRTAP9-6A8MVA2 160 aa1.66□□□□□ -2.14
ERCC6-213ENST00000624341 KMT2DO14686 5537 aa1.64□□□□□ -2.15
ERCC6-213ENST00000624341 KRTAP9-9Q9BYP9 154 aa1.62□□□□□ -2.15
ERCC6-213ENST00000624341 KRTAP9-4Q9BYQ2 154 aa1.62□□□□□ -2.15
ERCC6-213ENST00000624341 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
ERCC6-213ENST00000624341 MT1AP04731 61 aa1.6□□□□□ -2.15
ERCC6-213ENST00000624341 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
ERCC6-213ENST00000624341 MUC12Q9UKN1 5478 aa1.58□□□□□ -2.16
ERCC6-213ENST00000624341 LCE4AQ5TA78 99 aa1.57□□□□□ -2.16
ERCC6-213ENST00000624341 KRTAP4-11Q9BYQ6 195 aa1.55□□□□□ -2.16
ERCC6-213ENST00000624341 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
ERCC6-213ENST00000624341 KRTAP6-2Q3LI66 62 aa1.53□□□□□ -2.16
ERCC6-213ENST00000624341 KRTAP4-12Q9BQ66 201 aa1.53□□□□□ -2.16
ERCC6-213ENST00000624341 KRTAP4-2Q9BYR5 136 aa1.52□□□□□ -2.17
ERCC6-213ENST00000624341 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
ERCC6-213ENST00000624341 KRTAP5-4Q6L8H1 288 aa1.45□□□□□ -2.18
ERCC6-213ENST00000624341 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
ERCC6-213ENST00000624341 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
ERCC6-213ENST00000624341 KRTAP5-5Q701N2 237 aaPredicted RBP1.4□□□□□ -2.19
ERCC6-213ENST00000624341 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
ERCC6-213ENST00000624341 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
ERCC6-213ENST00000624341 KRTAP5-2Q701N4 177 aa1.35□□□□□ -2.19
ERCC6-213ENST00000624341 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.19
ERCC6-213ENST00000624341 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
ERCC6-213ENST00000624341 KRTAP5-8O75690 187 aa1.21□□□□□ -2.22
ERCC6-213ENST00000624341 KRTAP4-4Q9BYR3 166 aa1.17□□□□□ -2.22
ERCC6-213ENST00000624341 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.22
ERCC6-213ENST00000624341 MUC5BQ9HC84 5762 aaPredicted RBP1.15□□□□□ -2.23
ERCC6-213ENST00000624341 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
ERCC6-213ENST00000624341 KRTAP5-1Q6L8H4 278 aa1.11□□□□□ -2.23
ERCC6-213ENST00000624341 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
ERCC6-213ENST00000624341 KRTAP5-11Q6L8G4 156 aa0.98□□□□□ -2.25
ERCC6-213ENST00000624341 KRTAP21-2Q3LI59 83 aa0.86□□□□□ -2.27
ERCC6-213ENST00000624341 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
ERCC6-213ENST00000624341 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 132.4 ms