RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 KMT2CQ8NEZ4 4911 aaKnown RBP3.73□□□□□ -1.81
SLC6A6-210ENST00000622186 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
SLC6A6-210ENST00000622186 RYR2Q92736 4967 aa3.71□□□□□ -1.82
SLC6A6-210ENST00000622186 RYR3Q15413 4870 aa3.71□□□□□ -1.82
SLC6A6-210ENST00000622186 LRP2P98164 4655 aa3.7□□□□□ -1.82
SLC6A6-210ENST00000622186 MT1EP04732 61 aa3.7□□□□□ -1.82
SLC6A6-210ENST00000622186 MT1MQ8N339 61 aa3.68□□□□□ -1.82
SLC6A6-210ENST00000622186 HERC2O95714 4834 aa3.67□□□□□ -1.82
SLC6A6-210ENST00000622186 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
SLC6A6-210ENST00000622186 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
SLC6A6-210ENST00000622186 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
SLC6A6-210ENST00000622186 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
SLC6A6-210ENST00000622186 LCE2AQ5TA79 106 aaPredicted RBP3.62□□□□□ -1.83
SLC6A6-210ENST00000622186 FLGP20930 4061 aaPredicted RBP3.55□□□□□ -1.84
SLC6A6-210ENST00000622186 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
SLC6A6-210ENST00000622186 PCLOQ9Y6V0 5065 aa3.51□□□□□ -1.85
SLC6A6-210ENST00000622186 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
SLC6A6-210ENST00000622186 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.86
SLC6A6-210ENST00000622186 MT1AP04731 61 aa3.46□□□□□ -1.86
SLC6A6-210ENST00000622186 EPPK1P58107 5090 aaKnown RBP3.45□□□□□ -1.86
SLC6A6-210ENST00000622186 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
SLC6A6-210ENST00000622186 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
SLC6A6-210ENST00000622186 KIAA1109Q2LD37 5005 aa3.43□□□□□ -1.86
SLC6A6-210ENST00000622186 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
SLC6A6-210ENST00000622186 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
SLC6A6-210ENST00000622186 ABCA13Q86UQ4 5058 aa3.4□□□□□ -1.87
SLC6A6-210ENST00000622186 KRTAP19-2Q3LHN2 52 aa3.35□□□□□ -1.87
SLC6A6-210ENST00000622186 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
SLC6A6-210ENST00000622186 MUC2Q02817 5179 aa3.29□□□□□ -1.88
SLC6A6-210ENST00000622186 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
SLC6A6-210ENST00000622186 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
SLC6A6-210ENST00000622186 FSIP2Q5CZC0 6907 aa3.2□□□□□ -1.9
SLC6A6-210ENST00000622186 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
SLC6A6-210ENST00000622186 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
SLC6A6-210ENST00000622186 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
SLC6A6-210ENST00000622186 HMCN2Q8NDA2 5059 aa3.09□□□□□ -1.91
SLC6A6-210ENST00000622186 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
SLC6A6-210ENST00000622186 FAT4Q6V0I7 4981 aa3.03□□□□□ -1.92
SLC6A6-210ENST00000622186 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
SLC6A6-210ENST00000622186 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
SLC6A6-210ENST00000622186 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
SLC6A6-210ENST00000622186 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
SLC6A6-210ENST00000622186 UBR4Q5T4S7 5183 aa2.92□□□□□ -1.94
SLC6A6-210ENST00000622186 RNF213Q63HN8 5207 aa2.89□□□□□ -1.95
SLC6A6-210ENST00000622186 KMT2DO14686 5537 aa2.85□□□□□ -1.95
SLC6A6-210ENST00000622186 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.95
SLC6A6-210ENST00000622186 NEBP20929 6669 aa2.75□□□□□ -1.97
SLC6A6-210ENST00000622186 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
SLC6A6-210ENST00000622186 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
SLC6A6-210ENST00000622186 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
SLC6A6-210ENST00000622186 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
SLC6A6-210ENST00000622186 USH2AO75445 5202 aa2.61□□□□□ -1.99
SLC6A6-210ENST00000622186 SSPOA2VEC9 5147 aa2.56□□□□□ -2
SLC6A6-210ENST00000622186 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
SLC6A6-210ENST00000622186 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SLC6A6-210ENST00000622186 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
SLC6A6-210ENST00000622186 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
SLC6A6-210ENST00000622186 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
SLC6A6-210ENST00000622186 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
SLC6A6-210ENST00000622186 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
SLC6A6-210ENST00000622186 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
SLC6A6-210ENST00000622186 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
SLC6A6-210ENST00000622186 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
SLC6A6-210ENST00000622186 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
SLC6A6-210ENST00000622186 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
SLC6A6-210ENST00000622186 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
SLC6A6-210ENST00000622186 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
SLC6A6-210ENST00000622186 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
SLC6A6-210ENST00000622186 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
SLC6A6-210ENST00000622186 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
SLC6A6-210ENST00000622186 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
SLC6A6-210ENST00000622186 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.17
SLC6A6-210ENST00000622186 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
SLC6A6-210ENST00000622186 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
SLC6A6-210ENST00000622186 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
SLC6A6-210ENST00000622186 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
SLC6A6-210ENST00000622186 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms