RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
SIRPA-204ENST00000622179 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
SIRPA-204ENST00000622179 SPRR2EP22531 72 aa4.31□□□□□ -1.72
SIRPA-204ENST00000622179 SPRR2BP35325 72 aa4.31□□□□□ -1.72
SIRPA-204ENST00000622179 SPRR2AP35326 72 aa4.31□□□□□ -1.72
SIRPA-204ENST00000622179 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
SIRPA-204ENST00000622179 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
SIRPA-204ENST00000622179 MT1MQ8N339 61 aa4.26□□□□□ -1.73
SIRPA-204ENST00000622179 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
SIRPA-204ENST00000622179 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
SIRPA-204ENST00000622179 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
SIRPA-204ENST00000622179 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
SIRPA-204ENST00000622179 SPRR2DP22532 72 aa4.13□□□□□ -1.75
SIRPA-204ENST00000622179 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
SIRPA-204ENST00000622179 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
SIRPA-204ENST00000622179 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
SIRPA-204ENST00000622179 LCE2DQ5TA82 110 aaPredicted RBP4.11□□□□□ -1.75
SIRPA-204ENST00000622179 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
SIRPA-204ENST00000622179 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
SIRPA-204ENST00000622179 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
SIRPA-204ENST00000622179 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
SIRPA-204ENST00000622179 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
SIRPA-204ENST00000622179 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
SIRPA-204ENST00000622179 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
SIRPA-204ENST00000622179 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
SIRPA-204ENST00000622179 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
SIRPA-204ENST00000622179 MT1AP04731 61 aa3.84□□□□□ -1.79
SIRPA-204ENST00000622179 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
SIRPA-204ENST00000622179 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
SIRPA-204ENST00000622179 MT3P25713 68 aa3.76□□□□□ -1.81
SIRPA-204ENST00000622179 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
SIRPA-204ENST00000622179 MT4P47944 62 aa3.74□□□□□ -1.81
SIRPA-204ENST00000622179 PRM1P04553 51 aa3.72□□□□□ -1.81
SIRPA-204ENST00000622179 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
SIRPA-204ENST00000622179 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
SIRPA-204ENST00000622179 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
SIRPA-204ENST00000622179 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
SIRPA-204ENST00000622179 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
SIRPA-204ENST00000622179 KRTAP9-7A8MTY7 169 aa3.51□□□□□ -1.85
SIRPA-204ENST00000622179 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
SIRPA-204ENST00000622179 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
SIRPA-204ENST00000622179 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
SIRPA-204ENST00000622179 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
SIRPA-204ENST00000622179 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
SIRPA-204ENST00000622179 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
SIRPA-204ENST00000622179 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
SIRPA-204ENST00000622179 NEBP20929 6669 aa3.23□□□□□ -1.89
SIRPA-204ENST00000622179 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
SIRPA-204ENST00000622179 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
SIRPA-204ENST00000622179 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
SIRPA-204ENST00000622179 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
SIRPA-204ENST00000622179 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
SIRPA-204ENST00000622179 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
SIRPA-204ENST00000622179 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
SIRPA-204ENST00000622179 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
SIRPA-204ENST00000622179 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
SIRPA-204ENST00000622179 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
SIRPA-204ENST00000622179 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
SIRPA-204ENST00000622179 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
SIRPA-204ENST00000622179 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
SIRPA-204ENST00000622179 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -1.99
SIRPA-204ENST00000622179 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -1.99
SIRPA-204ENST00000622179 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
SIRPA-204ENST00000622179 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
SIRPA-204ENST00000622179 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
SIRPA-204ENST00000622179 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
SIRPA-204ENST00000622179 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
SIRPA-204ENST00000622179 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
SIRPA-204ENST00000622179 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
SIRPA-204ENST00000622179 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
SIRPA-204ENST00000622179 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
SIRPA-204ENST00000622179 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
SIRPA-204ENST00000622179 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
SIRPA-204ENST00000622179 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
SIRPA-204ENST00000622179 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SIRPA-204ENST00000622179 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
SIRPA-204ENST00000622179 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms