RNA–Protein interactions for RNA: ENST00000618278.4

SLC6A6-207, Transcript of solute carrier family 6 member 6, humanhuman

TSL 5

Gene SLC6A6, Length 6,401 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-207ENST00000618278 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
SLC6A6-207ENST00000618278 KIAA1109Q2LD37 5005 aa3.39□□□□□ -1.87
SLC6A6-207ENST00000618278 MT1LQ93083 61 aa3.38□□□□□ -1.87
SLC6A6-207ENST00000618278 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
SLC6A6-207ENST00000618278 BIRC6Q9NR09 4857 aa3.36□□□□□ -1.87
SLC6A6-207ENST00000618278 MT1MQ8N339 61 aa3.35□□□□□ -1.87
SLC6A6-207ENST00000618278 MT1EP04732 61 aa3.35□□□□□ -1.87
SLC6A6-207ENST00000618278 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
SLC6A6-207ENST00000618278 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
SLC6A6-207ENST00000618278 RYR2Q92736 4967 aa3.31□□□□□ -1.88
SLC6A6-207ENST00000618278 FLGP20930 4061 aaPredicted RBP3.28□□□□□ -1.88
SLC6A6-207ENST00000618278 HERC2O95714 4834 aa3.25□□□□□ -1.89
SLC6A6-207ENST00000618278 HERC1Q15751 4861 aa3.25□□□□□ -1.89
SLC6A6-207ENST00000618278 KMT2CQ8NEZ4 4911 aaKnown RBP3.21□□□□□ -1.9
SLC6A6-207ENST00000618278 LCE2AQ5TA79 106 aaPredicted RBP3.21□□□□□ -1.9
SLC6A6-207ENST00000618278 PCLOQ9Y6V0 5065 aa3.19□□□□□ -1.9
SLC6A6-207ENST00000618278 LRP2P98164 4655 aa3.17□□□□□ -1.9
SLC6A6-207ENST00000618278 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
SLC6A6-207ENST00000618278 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
SLC6A6-207ENST00000618278 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.91
SLC6A6-207ENST00000618278 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
SLC6A6-207ENST00000618278 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
SLC6A6-207ENST00000618278 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
SLC6A6-207ENST00000618278 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
SLC6A6-207ENST00000618278 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.91
SLC6A6-207ENST00000618278 MT1AP04731 61 aa3.07□□□□□ -1.92
SLC6A6-207ENST00000618278 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
SLC6A6-207ENST00000618278 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
SLC6A6-207ENST00000618278 FSIP2Q5CZC0 6907 aa2.92□□□□□ -1.94
SLC6A6-207ENST00000618278 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
SLC6A6-207ENST00000618278 KRTAP9-4Q9BYQ2 154 aa2.91□□□□□ -1.94
SLC6A6-207ENST00000618278 ABCA13Q86UQ4 5058 aa2.91□□□□□ -1.94
SLC6A6-207ENST00000618278 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
SLC6A6-207ENST00000618278 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
SLC6A6-207ENST00000618278 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
SLC6A6-207ENST00000618278 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
SLC6A6-207ENST00000618278 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
SLC6A6-207ENST00000618278 UBR4Q5T4S7 5183 aa2.82□□□□□ -1.96
SLC6A6-207ENST00000618278 FAT4Q6V0I7 4981 aa2.79□□□□□ -1.96
SLC6A6-207ENST00000618278 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
SLC6A6-207ENST00000618278 KRTAP4-6Q9BYQ5 205 aa2.74□□□□□ -1.97
SLC6A6-207ENST00000618278 HMCN2Q8NDA2 5059 aa2.72□□□□□ -1.97
SLC6A6-207ENST00000618278 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.97
SLC6A6-207ENST00000618278 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.97
SLC6A6-207ENST00000618278 MUC2Q02817 5179 aa2.69□□□□□ -1.98
SLC6A6-207ENST00000618278 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
SLC6A6-207ENST00000618278 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
SLC6A6-207ENST00000618278 KMT2DO14686 5537 aa2.53□□□□□ -2.01
SLC6A6-207ENST00000618278 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
SLC6A6-207ENST00000618278 DSTQ03001 7570 aaKnown RBP2.5□□□□□ -2.01
SLC6A6-207ENST00000618278 FCGBPQ9Y6R7 5405 aaPredicted RBP2.48□□□□□ -2.01
SLC6A6-207ENST00000618278 NEBP20929 6669 aa2.39□□□□□ -2.03
SLC6A6-207ENST00000618278 USH2AO75445 5202 aa2.37□□□□□ -2.03
SLC6A6-207ENST00000618278 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
SLC6A6-207ENST00000618278 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
SLC6A6-207ENST00000618278 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
SLC6A6-207ENST00000618278 KRTAP5-9P26371 169 aa2.25□□□□□ -2.05
SLC6A6-207ENST00000618278 SSPOA2VEC9 5147 aa2.22□□□□□ -2.05
SLC6A6-207ENST00000618278 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
SLC6A6-207ENST00000618278 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
SLC6A6-207ENST00000618278 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
SLC6A6-207ENST00000618278 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
SLC6A6-207ENST00000618278 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
SLC6A6-207ENST00000618278 KRTAP5-8O75690 187 aa1.84□□□□□ -2.12
SLC6A6-207ENST00000618278 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
SLC6A6-207ENST00000618278 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
SLC6A6-207ENST00000618278 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
SLC6A6-207ENST00000618278 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
SLC6A6-207ENST00000618278 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
SLC6A6-207ENST00000618278 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
SLC6A6-207ENST00000618278 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
SLC6A6-207ENST00000618278 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
SLC6A6-207ENST00000618278 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
SLC6A6-207ENST00000618278 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
SLC6A6-207ENST00000618278 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
SLC6A6-207ENST00000618278 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
SLC6A6-207ENST00000618278 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.19□□□□□ -2.22
SLC6A6-207ENST00000618278 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms