RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 KRTAP12-1P59990 96 aa1.53□□□□□ -2.16
CBWD1-224ENST00000616803 ROMO1P60602 79 aa1.53□□□□□ -2.16
CBWD1-224ENST00000616803 KRTAP25-1Q3LHN0 102 aa1.53□□□□□ -2.16
CBWD1-224ENST00000616803 LINC01554Q52M75 96 aa1.53□□□□□ -2.16
CBWD1-224ENST00000616803 A0A0D9SG42 100 aa1.52□□□□□ -2.17
CBWD1-224ENST00000616803 CRCT1Q9UGL9 99 aa1.51□□□□□ -2.17
CBWD1-224ENST00000616803 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
CBWD1-224ENST00000616803 HERC1Q15751 4861 aa1.47□□□□□ -2.17
CBWD1-224ENST00000616803 SPINT4Q6UDR6 99 aa1.47□□□□□ -2.17
CBWD1-224ENST00000616803 R4GN34 69 aa1.47□□□□□ -2.17
CBWD1-224ENST00000616803 CRIPTQ9P021 101 aa1.46□□□□□ -2.18
CBWD1-224ENST00000616803 HMCN2Q8NDA2 5059 aa1.46□□□□□ -2.18
CBWD1-224ENST00000616803 C10orf95Q9H7T3 257 aa1.45□□□□□ -2.18
CBWD1-224ENST00000616803 PCLOQ9Y6V0 5065 aa1.45□□□□□ -2.18
CBWD1-224ENST00000616803 FLGP20930 4061 aaPredicted RBP1.44□□□□□ -2.18
CBWD1-224ENST00000616803 SPRR2GQ9BYE4 73 aa1.42□□□□□ -2.18
CBWD1-224ENST00000616803 MT1HP80294 61 aa1.41□□□□□ -2.18
CBWD1-224ENST00000616803 CAMK2N1Q7Z7J9 78 aa1.4□□□□□ -2.19
CBWD1-224ENST00000616803 MUC2Q02817 5179 aa1.4□□□□□ -2.19
CBWD1-224ENST00000616803 MT2AP02795 61 aa1.39□□□□□ -2.19
CBWD1-224ENST00000616803 MT1FP04733 61 aa1.38□□□□□ -2.19
CBWD1-224ENST00000616803 KRTAP19-8Q3LI54 63 aa1.37□□□□□ -2.19
CBWD1-224ENST00000616803 RNF213Q63HN8 5207 aa1.37□□□□□ -2.19
CBWD1-224ENST00000616803 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
CBWD1-224ENST00000616803 FAT4Q6V0I7 4981 aa1.36□□□□□ -2.19
CBWD1-224ENST00000616803 UBR4Q5T4S7 5183 aa1.35□□□□□ -2.19
CBWD1-224ENST00000616803 M0R2T5 61 aa1.35□□□□□ -2.19
CBWD1-224ENST00000616803 TNP1P09430 55 aa1.35□□□□□ -2.19
CBWD1-224ENST00000616803 MT1BP07438 61 aa1.34□□□□□ -2.19
CBWD1-224ENST00000616803 PLAC4Q8WY50 150 aa1.34□□□□□ -2.19
CBWD1-224ENST00000616803 MT1XP80297 61 aa1.31□□□□□ -2.2
CBWD1-224ENST00000616803 KRTAP8-1Q8IUC2 63 aa1.29□□□□□ -2.2
CBWD1-224ENST00000616803 PRO2289Q9P1D8 64 aa1.25□□□□□ -2.21
CBWD1-224ENST00000616803 LUZP6Q538Z0 58 aa1.24□□□□□ -2.21
CBWD1-224ENST00000616803 KRTAP19-5Q3LI72 72 aa1.2□□□□□ -2.22
CBWD1-224ENST00000616803 USH2AO75445 5202 aa1.19□□□□□ -2.22
CBWD1-224ENST00000616803 KRTAP19-6Q3LI70 58 aa1.18□□□□□ -2.22
CBWD1-224ENST00000616803 KRTAP19-7Q3SYF9 63 aa1.18□□□□□ -2.22
CBWD1-224ENST00000616803 SSPOA2VEC9 5147 aa1.15□□□□□ -2.23
CBWD1-224ENST00000616803 MT1EP04732 61 aa1.14□□□□□ -2.23
CBWD1-224ENST00000616803 MT1LQ93083 61 aa1.14□□□□□ -2.23
CBWD1-224ENST00000616803 KMT2DO14686 5537 aa1.11□□□□□ -2.23
CBWD1-224ENST00000616803 INE1O15225 51 aa1.09□□□□□ -2.23
CBWD1-224ENST00000616803 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.23
CBWD1-224ENST00000616803 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.23
CBWD1-224ENST00000616803 KRTAP2-1Q9BYU5 128 aa1.09□□□□□ -2.23
CBWD1-224ENST00000616803 MT1GP13640 62 aa1.07□□□□□ -2.24
CBWD1-224ENST00000616803 KRTAP19-3Q7Z4W3 81 aa1.07□□□□□ -2.24
CBWD1-224ENST00000616803 MT1MQ8N339 61 aa1.07□□□□□ -2.24
CBWD1-224ENST00000616803 SPRR2FQ96RM1 72 aa1.02□□□□□ -2.25
CBWD1-224ENST00000616803 MUC12Q9UKN1 5478 aa0.99□□□□□ -2.25
CBWD1-224ENST00000616803 FSIP2Q5CZC0 6907 aa0.99□□□□□ -2.25
CBWD1-224ENST00000616803 MT1AP04731 61 aa0.96□□□□□ -2.26
CBWD1-224ENST00000616803 KRTAP6-1Q3LI64 71 aa0.95□□□□□ -2.26
CBWD1-224ENST00000616803 MACF1Q9UPN3 7388 aaKnown RBP0.95□□□□□ -2.26
CBWD1-224ENST00000616803 SPRR2EP22531 72 aa0.94□□□□□ -2.26
CBWD1-224ENST00000616803 SPRR2BP35325 72 aa0.94□□□□□ -2.26
CBWD1-224ENST00000616803 SPRR2AP35326 72 aa0.94□□□□□ -2.26
CBWD1-224ENST00000616803 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
CBWD1-224ENST00000616803 SPRR2DP22532 72 aa0.91□□□□□ -2.26
CBWD1-224ENST00000616803 SYNE2Q8WXH0 6885 aaKnown RBP0.9□□□□□ -2.27
CBWD1-224ENST00000616803 MDN1Q9NU22 5596 aa0.89□□□□□ -2.27
CBWD1-224ENST00000616803 DSTQ03001 7570 aaKnown RBP0.88□□□□□ -2.27
CBWD1-224ENST00000616803 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
CBWD1-224ENST00000616803 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
CBWD1-224ENST00000616803 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
CBWD1-224ENST00000616803 SYNE1Q8NF91 8797 aaKnown RBP0.83□□□□□ -2.28
CBWD1-224ENST00000616803 NEBP20929 6669 aa0.83□□□□□ -2.28
CBWD1-224ENST00000616803 PRM1P04553 51 aa0.8□□□□□ -2.28
CBWD1-224ENST00000616803 KRTAP20-2Q3LI61 65 aa0.8□□□□□ -2.28
CBWD1-224ENST00000616803 KRTAP20-1Q3LI63 56 aa0.78□□□□□ -2.28
CBWD1-224ENST00000616803 MT4P47944 62 aa0.77□□□□□ -2.29
CBWD1-224ENST00000616803 MUC5ACP98088 5654 aa0.68□□□□□ -2.3
CBWD1-224ENST00000616803 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
CBWD1-224ENST00000616803 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.32
CBWD1-224ENST00000616803 GPR98Q8WXG9 6306 aa0.51□□□□□ -2.33
CBWD1-224ENST00000616803 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
CBWD1-224ENST00000616803 AHNAKQ09666 5890 aaKnown RBP0.42□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 33.2 ms