RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
CBWD1-224ENST00000616803 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
CBWD1-224ENST00000616803 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
CBWD1-224ENST00000616803 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
CBWD1-224ENST00000616803 FOXD1Q16676 465 aa17.81■□□□□ 0.44
CBWD1-224ENST00000616803 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
CBWD1-224ENST00000616803 POTEDQ86YR6 584 aa17■□□□□ 0.31
CBWD1-224ENST00000616803 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
CBWD1-224ENST00000616803 ADRA2BP18089 450 aa16.72■□□□□ 0.27
CBWD1-224ENST00000616803 MSH5O43196 834 aa16.69■□□□□ 0.26
CBWD1-224ENST00000616803 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
CBWD1-224ENST00000616803 MAPK8IP2Q13387 824 aaPredicted RBP15.33■□□□□ 0.04
CBWD1-224ENST00000616803 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
CBWD1-224ENST00000616803 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
CBWD1-224ENST00000616803 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
CBWD1-224ENST00000616803 CNKSR2Q8WXI2 1034 aa14.69□□□□□ -0.06
CBWD1-224ENST00000616803 DCAF8L1A6NGE4 600 aa14.61□□□□□ -0.07
CBWD1-224ENST00000616803 KCNA4P22459 653 aa14.6□□□□□ -0.07
CBWD1-224ENST00000616803 CACNB1Q02641 598 aaPredicted RBP14.56□□□□□ -0.08
CBWD1-224ENST00000616803 HOXD11P31277 338 aaPredicted RBP14.54□□□□□ -0.08
CBWD1-224ENST00000616803 NPM3O75607 178 aaKnown RBP14.51□□□□□ -0.09
CBWD1-224ENST00000616803 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
CBWD1-224ENST00000616803 RNF216Q9NWF9 866 aaPredicted RBP14.47□□□□□ -0.09
CBWD1-224ENST00000616803 RNF39Q9H2S5 420 aa14.28□□□□□ -0.12
CBWD1-224ENST00000616803 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
CBWD1-224ENST00000616803 DNAJC5BQ9UF47 199 aa13.98□□□□□ -0.17
CBWD1-224ENST00000616803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.86□□□□□ -0.19
CBWD1-224ENST00000616803 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
CBWD1-224ENST00000616803 SLC4A1APQ9BWU0 796 aaKnown RBP13.73□□□□□ -0.21
CBWD1-224ENST00000616803 U3KPZ7 1027 aaPredicted RBP13.67□□□□□ -0.22
CBWD1-224ENST00000616803 ZBTB22O15209 634 aa13.53□□□□□ -0.24
CBWD1-224ENST00000616803 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
CBWD1-224ENST00000616803 CAPN15O75808 1086 aa13.4□□□□□ -0.26
CBWD1-224ENST00000616803 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
CBWD1-224ENST00000616803 DSG3P32926 999 aa13.3□□□□□ -0.28
CBWD1-224ENST00000616803 MYCNP04198 464 aaPredicted RBP13.25□□□□□ -0.29
CBWD1-224ENST00000616803 POTEHQ6S545 545 aa13.22□□□□□ -0.29
CBWD1-224ENST00000616803 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
CBWD1-224ENST00000616803 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
CBWD1-224ENST00000616803 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
CBWD1-224ENST00000616803 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
CBWD1-224ENST00000616803 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
CBWD1-224ENST00000616803 ABCB7O75027 752 aa13.11□□□□□ -0.31
CBWD1-224ENST00000616803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
CBWD1-224ENST00000616803 APLP2Q06481 763 aa13.1□□□□□ -0.31
CBWD1-224ENST00000616803 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
CBWD1-224ENST00000616803 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
CBWD1-224ENST00000616803 POLA2Q14181 598 aa12.89□□□□□ -0.35
CBWD1-224ENST00000616803 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
CBWD1-224ENST00000616803 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
CBWD1-224ENST00000616803 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
CBWD1-224ENST00000616803 CHRDL2Q6WN34 429 aa12.49□□□□□ -0.41
CBWD1-224ENST00000616803 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
CBWD1-224ENST00000616803 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
CBWD1-224ENST00000616803 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
CBWD1-224ENST00000616803 FBLN2P98095 1184 aa12.31□□□□□ -0.44
CBWD1-224ENST00000616803 REM2Q8IYK8 340 aaPredicted RBP12.27□□□□□ -0.45
CBWD1-224ENST00000616803 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
CBWD1-224ENST00000616803 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
CBWD1-224ENST00000616803 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
CBWD1-224ENST00000616803 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
CBWD1-224ENST00000616803 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
CBWD1-224ENST00000616803 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
CBWD1-224ENST00000616803 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
CBWD1-224ENST00000616803 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
CBWD1-224ENST00000616803 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.48
CBWD1-224ENST00000616803 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
CBWD1-224ENST00000616803 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
CBWD1-224ENST00000616803 HAX1O00165 279 aa12□□□□□ -0.49
CBWD1-224ENST00000616803 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
CBWD1-224ENST00000616803 EVX2Q03828 476 aa11.91□□□□□ -0.5
CBWD1-224ENST00000616803 SPDYE1Q8NFV5 336 aaPredicted RBP11.88□□□□□ -0.51
CBWD1-224ENST00000616803 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
CBWD1-224ENST00000616803 FKBP8Q14318 412 aa11.82□□□□□ -0.52
CBWD1-224ENST00000616803 PROM2Q8N271 834 aa11.82□□□□□ -0.52
CBWD1-224ENST00000616803 CHADLQ6NUI6 762 aa11.77□□□□□ -0.53
CBWD1-224ENST00000616803 PRR29P0C7W0 189 aa11.71□□□□□ -0.53
CBWD1-224ENST00000616803 C19orf67A6NJJ6 358 aa11.66□□□□□ -0.54
CBWD1-224ENST00000616803 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
CBWD1-224ENST00000616803 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
CBWD1-224ENST00000616803 GABBR2O75899 941 aa11.55□□□□□ -0.56
CBWD1-224ENST00000616803 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
CBWD1-224ENST00000616803 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
CBWD1-224ENST00000616803 CD44P16070 742 aaKnown RBP11.48□□□□□ -0.57
CBWD1-224ENST00000616803 LHX8Q68G74 356 aa11.45□□□□□ -0.58
CBWD1-224ENST00000616803 MIER1Q8N108 512 aa11.39□□□□□ -0.59
CBWD1-224ENST00000616803 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
CBWD1-224ENST00000616803 PLCD3Q8N3E9 789 aa11.29□□□□□ -0.6
CBWD1-224ENST00000616803 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
CBWD1-224ENST00000616803 VASPP50552 380 aaPredicted RBP11.27□□□□□ -0.61
CBWD1-224ENST00000616803 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
CBWD1-224ENST00000616803 ZNF579Q8NAF0 562 aaKnown RBP11.25□□□□□ -0.61
CBWD1-224ENST00000616803 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
CBWD1-224ENST00000616803 NUBP1P53384 320 aa11.22□□□□□ -0.61
CBWD1-224ENST00000616803 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
CBWD1-224ENST00000616803 IFNLR1Q8IU57 520 aaPredicted RBP11.21□□□□□ -0.61
CBWD1-224ENST00000616803 PHF12Q96QT6 1004 aa11.21□□□□□ -0.61
CBWD1-224ENST00000616803 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
CBWD1-224ENST00000616803 CLCN6P51797 869 aa11.2□□□□□ -0.62
CBWD1-224ENST00000616803 TSPYL2Q9H2G4 693 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms